Mp5g11830



Description

Annotation

Database ID Description
FunFam G3DSA:1.10.10.60:FF:000009 transcription factor MYB1R1
SUPERFAMILY SSF46689 Homeodomain-like
FunFam G3DSA:1.10.10.60:FF:000154 Transcription factor SRM1
Gene3D G3DSA:1.10.10.60 -
Pfam PF00249 Myb-like DNA-binding domain
ProSiteProfiles PS50090 Myb-like domain profile.
MobiDBLite mobidb-lite consensus disorder prediction
ProSiteProfiles PS51294 Myb-type HTH DNA-binding domain profile.
NCBIfam TIGR01557 myb-like DNA-binding domain, SHAQKYF class
PANTHER PTHR44042 DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED
SMART SM00717 sant
CDD cd00167 SANT
ProSiteProfiles PS51293 SANT domain profile.
KOG KOG0724 Zuotin and related molecular chaperones (DnaJ superfamily), contains DNA-binding domains; C-term missing; [O]
MapolyID Mapoly0143s0011 -

Nomenclature

Gene symbol Product Transcript ID Status
MpRR-MYB5 transcription factor, MYB Published

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp5g11830.1 chr5:15687556..15689996 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.