PPR repeat // PPR repeat family
Database | ID | Description |
---|---|---|
PFAM | PF01535 | PPR repeat |
PANTHER | PTHR24015 | FAMILY NOT NAMED |
PFAM | PF13041 | PPR repeat family |
PANTHER | PTHR24015:SF421 |
Gene symbol | Product | Transcript ID | Status |
---|---|---|---|
MpPPR_5 | Pentatricopeptide repeat proteins | Published |
Sequences: |
Gene UTR + CDS + intron |
>Mapoly0002s0014.1 ATGCAGCAAC TATCGGTCAG GGATCACAGT GCAGTTTGTG CGAGCCCCTT CACACGGTGA AACCTCATTC TTCTTCGATT CGTTTGTTTG GTGTGGCATT GGAGGAGAGT GGGAAGATGT GATGTCGCAT TTGATGCAAT TCCGTGGTTG CTCAGCCGGC GGTGGCGGTT GGAGCTGTGA CATTTTCATG CTGATGATTC CGACCTCGTG AAATCATCAG AATTGCAGTT GTCCGTTGCG CGTTCTGCTG ACGCACCATT GCTGCGATTT GTGCAGATGG AGAGGTGGAT TGAATGTGTT CCATGGGAGC TCCGGGAGCG GCCGTGTTCT GTTCACCGGA AGTAACTTCG AAAAATCGCT CGGCATTGGC AAGTCATGCA CCTGCTTGTC TATGAGCTGG AGCGACCCTG GCCCGACAGC TCCCGCTGTG AAAACGAAAC CCAAGAAGAA AAGCTGGAAC AGGTTGGTGT GGAGTACGGA ATTCTCTTCA GATTTTCTCG CCTGCAAACC AGCCAGCTCA ATTGCCCTTG GACCCTAGCA TGGAGTTTGC CGCTGAGTTT AATTGATGAA TTTCATTCAA TTTTGTTCAT TAGTTTTATT TGCGAGGAGT GGGAATTTGT GTTTCTGAAT CTGCATCTCA TACCTTGTGG GAAAATTCGC ATATCAGGAA TGTGCATCTC ACATCTATGG CCCTAGTGTC GTAACAGCGT GGCCTGGGAT GGATGGTCCT CGTTGTCAAT TCACTTATGG TGCAGGCGAA CTTGCGATAT TTGTTACCAA CATGACCGAC CTCATTATTT TTCTCCCTGT AGCACAGGAA AGTCCAGACG AGGTTATGGA TGGAACACCG AACAGGGGAA ATCGAGTGTA TACCAAATCA TGAGCCCCGC TGCAGCCGAG CTCGTTCGTT CTCTCCAGAA ACAGAAGGAC GTTGACGGAT TGTGGGATGC ATTGGATTCT CTACCTTCAG GGCGGGAAAG CTGGTCGGAC CTCACCGATT GTGTCATGGA AATTCGGAAC CAGCAAAATT GGCTACTTGT CATACAGGTA AATTTCGACC TTCTGTTTTT GGATGCAGTA GATGTGAGAA GTATGCCTCA TCCCATTCAC GATTGTGAGA GTTTAGGCAG ATTGTCTAGT CTGACCCTCG TATGACCCGT ATCCATGTTC TCTCGGCCTC CAGTTTGTTT TTCAATTCAT TAGGTAAATT TATTTTTCGA ACCCGTAGAA GGACCAATGC AGATTCGACC GAATGTTCTA ACATTTTACG TGGACTTAAT CCAACTGTGC AGATACTGGA GTGGATGCTG CAGAGCAAGC AGTTTCGTGC TGATGTTGTT TGCTACAATC TTCTGATCGA AGCCTATGGG AAGATCGGTC AGTATACTGA AGCGGAGAAG ACATTCTTTC TTTTAAGGAA GTCCTTTGTT GCCCCTACCG AGATGAGTTA CAATATGCTC ATGGGTGCCT ACTCAAAAGC CGGTTTGCTC GACAAAGCTG AGAGACTATT TGATCAAATG AAGGAGGACA AGTATATTCC TGGTAATGTC TCCACCTCTC TGATTTCGTT GAAGCCAGCA GCTCGTTATC AAAAGCTTAA ATGTTTCTAG TTGGGGACAT GCAGAATTCT GATTATTCTC GTTCTGCATT ATTCTCATGT AAGGAGTGAA TAGAAAAGTA AAGATTAAAG AGTTGATGGA AAAGTATCTG ACTCTCAATT TCTCTCGCGT TGTGGATGCA GACCTCTCAA CATACAACAT TTTTCTCGAA GTACTCGCAA AGGCAGGCAA ATACAAGAAG GCCGAGCGAG TATTCTCGGA GATGAAAGCG AACTGCAATC CGTCCGCAGC TACTTACACG TCGATGATAA ACATATACGG TAGAGTAAGT TTATCTATTT GATTTCTTCT CATACGTTTT TGGCGTTCTT AAGACACTTC ACATACACTT TTGTGTGAAT TCACAGCAAA AGTACTTTAT CCTTCAATAT TCTTCACATG AAGTAGATTT GGTTTCACCA GGAATCCAGC CATGTGTTGG CAGCCGTTTG TTGTTTGTGT GGTAAAACTC CTCGGGCTGC CCTCGTTTAT AATATTATAC CTGCCGCAGG CTAGGCTCCC GGAGATGGCA GAGAAGCTGT ATTCTAGTAT GAGGGACTCG GATTGTCCAC CGACTCTGTA CACCATGACT GCCCTGATCA ACGCCTACGC CAAAGAAGGA TTATGCGAGA AAGCCGAGGA AGCCTTTCAC AACATCAAAG CTCTTGGTCT TGAACCTGAT GTGTACAGCT ACAACGCTTT GATGGGAGCC TACAGGTCTG TGTTGCAGTC GTGTACTCTT CATTCTACTA CCCCGTCAAT GAATCACAGG GATTCTATGG AACTTAATCT CTACATTGAA ATCTAGGTGA TGGAGTTCTA TCTTTTTCCT CATGGCCAAT TCGTATAACT ATCTGTTCGA AAGCCTCCCT GCAGAGTGTT TGACACGTGT TCTTGGTGCA GTCATGGAGG TTTCCCAGCG GGTGCTTCTG AAGTTTTTGA CGCCATGAAG GATGATGGCA TAGATCCGGA TCAAGTATCG TACAACATTC TCATAGACGC TTTCAGTCGA GCCGGTCAAA GTGAAGGTAA GGAGCCACTG CCATGTTTTG TGTAATTTTT GTGGGGTTTT CTCTTTATTA TCTGTTGCTA GAAAGGCGTT GTCTACCACT GGCTGGTTCT CTCAGTGGGA AACCTGAACA TTTCAGCTTT TGCTGTATCT GTGCAGAGGC AGAGAGGGTT TTCAAGATTA TGAAGGATCA TGGCTTCCAG CCAACTTCAA GGTCCTACAT GCTGCTCCTG AAAGGGTTGT TAAGAGCAGG GCAAGTGATG AAAGCTGAGA ATCTAATTAA AGGCATGGAA GCTGATGGTC GCAAACCTGA TACATTCATG TACAATTCGT TATTACACGC GAAGGGGACC CGAGGAAATT TTGTAGAGGT TGAACGTTTA TTTAATGTAA TGAAAAGTGG TTCTAGGAGT CGGCCTGATA TATCTACTTA TAACATACTC ATAAACATCA ACGCCCAGGC AGGGTTTATA GATAAAGCAG AGAATATTTT CAATAATTTA GAACGGGAAG GGCTTGTGCC CAATGTCACC ACTTGGACTT CTCTCATGGG CGCTTATTCC AAGAGGAAGC TGTTCAAGAA GTGCTTGAAT GTGTGGGATA GAATGATAAA AGCTCGCTGT GTACCAGATG CAGCAACTTG GAAGGTTTTT CTTGCATCTT GCAATACCCA GGAAGAAATG GACGAAGTCA CAGCATTGAC CCAGCAATAT CAGTCCGAAG GACTTAGAAA AGCTCGTAAT AAAGATCATA ATTATCAGTG A |
mRNA UTR + CDS |
>Mapoly0002s0014.1 ATGCAGCAAC TATCGGTCAG GGATCACAGT GCAGTTTGTG CGAGCCCCTT CACACGATGG AGAGGTGGAT TGAATGTGTT CCATGGGAGC TCCGGGAGCG GCCGTGTTCT GTTCACCGGA AGTAACTTCG AAAAATCGCT CGGCATTGGC AAGTCATGCA CCTGCTTGTC TATGAGCTGG AGCGACCCTG GCCCGACAGC TCCCGCTGTG AAAACGAAAC CCAAGAAGAA AAGCTGGAAC AGCACAGGAA AGTCCAGACG AGGTTATGGA TGGAACACCG AACAGGGGAA ATCGAGTGTA TACCAAATCA TGAGCCCCGC TGCAGCCGAG CTCGTTCGTT CTCTCCAGAA ACAGAAGGAC GTTGACGGAT TGTGGGATGC ATTGGATTCT CTACCTTCAG GGCGGGAAAG CTGGTCGGAC CTCACCGATT GTGTCATGGA AATTCGGAAC CAGCAAAATT GGCTACTTGT CATACAGATA CTGGAGTGGA TGCTGCAGAG CAAGCAGTTT CGTGCTGATG TTGTTTGCTA CAATCTTCTG ATCGAAGCCT ATGGGAAGAT CGGTCAGTAT ACTGAAGCGG AGAAGACATT CTTTCTTTTA AGGAAGTCCT TTGTTGCCCC TACCGAGATG AGTTACAATA TGCTCATGGG TGCCTACTCA AAAGCCGGTT TGCTCGACAA AGCTGAGAGA CTATTTGATC AAATGAAGGA GGACAAGTAT ATTCCTGACC TCTCAACATA CAACATTTTT CTCGAAGTAC TCGCAAAGGC AGGCAAATAC AAGAAGGCCG AGCGAGTATT CTCGGAGATG AAAGCGAACT GCAATCCGTC CGCAGCTACT TACACGTCGA TGATAAACAT ATACGGTAGA GCTAGGCTCC CGGAGATGGC AGAGAAGCTG TATTCTAGTA TGAGGGACTC GGATTGTCCA CCGACTCTGT ACACCATGAC TGCCCTGATC AACGCCTACG CCAAAGAAGG ATTATGCGAG AAAGCCGAGG AAGCCTTTCA CAACATCAAA GCTCTTGGTC TTGAACCTGA TGTGTACAGC TACAACGCTT TGATGGGAGC CTACAGTCAT GGAGGTTTCC CAGCGGGTGC TTCTGAAGTT TTTGACGCCA TGAAGGATGA TGGCATAGAT CCGGATCAAG TATCGTACAA CATTCTCATA GACGCTTTCA GTCGAGCCGG TCAAAGTGAA GAGGCAGAGA GGGTTTTCAA GATTATGAAG GATCATGGCT TCCAGCCAAC TTCAAGGTCC TACATGCTGC TCCTGAAAGG GTTGTTAAGA GCAGGGCAAG TGATGAAAGC TGAGAATCTA ATTAAAGGCA TGGAAGCTGA TGGTCGCAAA CCTGATACAT TCATGTACAA TTCGTTATTA CACGCGAAGG GGACCCGAGG AAATTTTGTA GAGGTTGAAC GTTTATTTAA TGTAATGAAA AGTGGTTCTA GGAGTCGGCC TGATATATCT ACTTATAACA TACTCATAAA CATCAACGCC CAGGCAGGGT TTATAGATAA AGCAGAGAAT ATTTTCAATA ATTTAGAACG GGAAGGGCTT GTGCCCAATG TCACCACTTG GACTTCTCTC ATGGGCGCTT ATTCCAAGAG GAAGCTGTTC AAGAAGTGCT TGAATGTGTG GGATAGAATG ATAAAAGCTC GCTGTGTACC AGATGCAGCA ACTTGGAAGG TTTTTCTTGC ATCTTGCAAT ACCCAGGAAG AAATGGACGA AGTCACAGCA TTGACCCAGC AATATCAGTC CGAAGGACTT AGAAAAGCTC GTAATAAAGA TCATAATTAT CAGTGA |
CDS |
>Mapoly0002s0014.1 ATGCAGCAAC TATCGGTCAG GGATCACAGT GCAGTTTGTG CGAGCCCCTT CACACGATGG AGAGGTGGAT TGAATGTGTT CCATGGGAGC TCCGGGAGCG GCCGTGTTCT GTTCACCGGA AGTAACTTCG AAAAATCGCT CGGCATTGGC AAGTCATGCA CCTGCTTGTC TATGAGCTGG AGCGACCCTG GCCCGACAGC TCCCGCTGTG AAAACGAAAC CCAAGAAGAA AAGCTGGAAC AGCACAGGAA AGTCCAGACG AGGTTATGGA TGGAACACCG AACAGGGGAA ATCGAGTGTA TACCAAATCA TGAGCCCCGC TGCAGCCGAG CTCGTTCGTT CTCTCCAGAA ACAGAAGGAC GTTGACGGAT TGTGGGATGC ATTGGATTCT CTACCTTCAG GGCGGGAAAG CTGGTCGGAC CTCACCGATT GTGTCATGGA AATTCGGAAC CAGCAAAATT GGCTACTTGT CATACAGATA CTGGAGTGGA TGCTGCAGAG CAAGCAGTTT CGTGCTGATG TTGTTTGCTA CAATCTTCTG ATCGAAGCCT ATGGGAAGAT CGGTCAGTAT ACTGAAGCGG AGAAGACATT CTTTCTTTTA AGGAAGTCCT TTGTTGCCCC TACCGAGATG AGTTACAATA TGCTCATGGG TGCCTACTCA AAAGCCGGTT TGCTCGACAA AGCTGAGAGA CTATTTGATC AAATGAAGGA GGACAAGTAT ATTCCTGACC TCTCAACATA CAACATTTTT CTCGAAGTAC TCGCAAAGGC AGGCAAATAC AAGAAGGCCG AGCGAGTATT CTCGGAGATG AAAGCGAACT GCAATCCGTC CGCAGCTACT TACACGTCGA TGATAAACAT ATACGGTAGA GCTAGGCTCC CGGAGATGGC AGAGAAGCTG TATTCTAGTA TGAGGGACTC GGATTGTCCA CCGACTCTGT ACACCATGAC TGCCCTGATC AACGCCTACG CCAAAGAAGG ATTATGCGAG AAAGCCGAGG AAGCCTTTCA CAACATCAAA GCTCTTGGTC TTGAACCTGA TGTGTACAGC TACAACGCTT TGATGGGAGC CTACAGTCAT GGAGGTTTCC CAGCGGGTGC TTCTGAAGTT TTTGACGCCA TGAAGGATGA TGGCATAGAT CCGGATCAAG TATCGTACAA CATTCTCATA GACGCTTTCA GTCGAGCCGG TCAAAGTGAA GAGGCAGAGA GGGTTTTCAA GATTATGAAG GATCATGGCT TCCAGCCAAC TTCAAGGTCC TACATGCTGC TCCTGAAAGG GTTGTTAAGA GCAGGGCAAG TGATGAAAGC TGAGAATCTA ATTAAAGGCA TGGAAGCTGA TGGTCGCAAA CCTGATACAT TCATGTACAA TTCGTTATTA CACGCGAAGG GGACCCGAGG AAATTTTGTA GAGGTTGAAC GTTTATTTAA TGTAATGAAA AGTGGTTCTA GGAGTCGGCC TGATATATCT ACTTATAACA TACTCATAAA CATCAACGCC CAGGCAGGGT TTATAGATAA AGCAGAGAAT ATTTTCAATA ATTTAGAACG GGAAGGGCTT GTGCCCAATG TCACCACTTG GACTTCTCTC ATGGGCGCTT ATTCCAAGAG GAAGCTGTTC AAGAAGTGCT TGAATGTGTG GGATAGAATG ATAAAAGCTC GCTGTGTACC AGATGCAGCA ACTTGGAAGG TTTTTCTTGC ATCTTGCAAT ACCCAGGAAG AAATGGACGA AGTCACAGCA TTGACCCAGC AATATCAGTC CGAAGGACTT AGAAAAGCTC GTAATAAAGA TCATAATTAT CAGTGA |
Protein |
>Mapoly0002s0014.1 MQQLSVRDHS AVCASPFTRW RGGLNVFHGS SGSGRVLFTG SNFEKSLGIG KSCTCLSMSW SDPGPTAPAV KTKPKKKSWN STGKSRRGYG WNTEQGKSSV YQIMSPAAAE LVRSLQKQKD VDGLWDALDS LPSGRESWSD LTDCVMEIRN QQNWLLVIQI LEWMLQSKQF RADVVCYNLL IEAYGKIGQY TEAEKTFFLL RKSFVAPTEM SYNMLMGAYS KAGLLDKAER LFDQMKEDKY IPDLSTYNIF LEVLAKAGKY KKAERVFSEM KANCNPSAAT YTSMINIYGR ARLPEMAEKL YSSMRDSDCP PTLYTMTALI NAYAKEGLCE KAEEAFHNIK ALGLEPDVYS YNALMGAYSH GGFPAGASEV FDAMKDDGID PDQVSYNILI DAFSRAGQSE EAERVFKIMK DHGFQPTSRS YMLLLKGLLR AGQVMKAENL IKGMEADGRK PDTFMYNSLL HAKGTRGNFV EVERLFNVMK SGSRSRPDIS TYNILININA QAGFIDKAEN IFNNLEREGL VPNVTTWTSL MGAYSKRKLF KKCLNVWDRM IKARCVPDAA TWKVFLASCN TQEEMDEVTA LTQQYQSEGL RKARNKDHNY Q |