Mapoly0003s0222



Description

Endoribonucleases producing 5'-phosphomonoesters.

Annotation

Database ID Description
GO GO:0006396 RNA processing
GO GO:0003723 RNA binding
GO GO:0005524 ATP binding
KEGGORTH K11592 endoribonuclease Dicer [EC:3.1.26.-]
PANTHER PTHR14950:SF16
PFAM PF02170 PAZ domain
EC 3.1.26.- Endoribonucleases producing 5'-phosphomonoesters.
PANTHER PTHR14950 HELICASE-RELATED
PFAM PF00035 Double-stranded RNA binding motif
GO GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters
GO GO:0005515 protein binding
PFAM PF03368 Dicer dimerisation domain
PFAM PF00636 Ribonuclease III domain
PFAM PF00270 DEAD/DEAH box helicase
GO GO:0004525 ribonuclease III activity
PFAM PF00271 Helicase conserved C-terminal domain
PFAM PF14709 double strand RNA binding domain from DEAD END PROTEIN 1
GO GO:0003676 nucleic acid binding
KOG KOG0701 dsRNA-specific nuclease Dicer and related ribonucleases

Nomenclature

No gene symbols are registered for this gene.

Transcript models

Transcript ID Location Sequences Extract region
Mapoly0003s0222.1 scaffold_3:2308982..2324333 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.