SWI/SNF-RELATED CHROMATIN BINDING PROTEIN
Database | ID | Description |
---|---|---|
KOG | KOG0381 | HMG box-containing protein |
PFAM | PF00505 | HMG (high mobility group) box |
PANTHER | PTHR13711 | SWI/SNF-RELATED CHROMATIN BINDING PROTEIN |
PANTHER | PTHR13711:SF167 |
Gene symbol | Product | Transcript ID | Status |
---|---|---|---|
MpHMGBOX1 | transcription factor, HMG-box | Published |
Sequences: |
Gene UTR + CDS + intron |
>Mapoly0013s0048.1 CGAGAGTAAT CTTTCAGTAG GCGTTAAACG TGTCTCTCTG CTGTCGGAGC TCTTCACCTT GTGTACGCCT GTTCAAGAAG CGTATGATCT CCATATTGCT TTGACAGTTT GACGACTTGT TTACGTTTCT GAAGTTCGTA GCGCTGTCCA ATCCTTTTTT TAATAATTGG ACTCGTTTGT TGTGCTTTAG GCCAACAGAA CTCTCTCTAA GAGAGTTTTC TTGGTCTTGT TCCGATGGTA GACGACGGTT ATGCCGTCAG AGTTGCGTAA GTTTATTTTT TGAGCCATGA TGTGTCCTTT TTTTCGATTC AGGTGTGACT TGCCTGTATT TGAAGACTCT CGGAATTTGC TGCCATTCCG GGCTGAGTTT CCGTCTGTGG AGCGATGCTC AGTTTGATGA ATACTAGTTG CATAACGAGT GTCCGCACCC GATACCACGC CGGCTCTGCG TGCTCGCTCG TCGCGCATGC ATTCTTGTTC GTCTATTCTC ACTGATTGGA GTTTTCATGT GCAGCGTACT CTGAGCCTTT ACAATGAAGG ATACGGGGAA GGCGAAGAAA GGGGCGAACA CGCGGGTTGT GAAAGAGAAG ACTAGCAAAG TTGTAGACAA GTGAGTATGG GATCTTTGTC TCTTTTACTA GCTTTGAGAG TGGTCACTGA AGTCCTCCTG TTTTCTCATT TATCTAACGC GGAAAGAAAA TTTCAGGGAT ATAAAGAAGC GTAAGGCTGT TGTCAAAGAC GCCAAGCCAA AGAAGCAACG GAAGTCAAAG AAGGCGACGA AAGCTGCGAA GGACCCGAAC CAACCGAAGA GGCCACCAAC TGCCTTCTTC ATCTTTCTGT AAGAATAACA GATGTTTATC TTTCGGTGTG AATCTAATGT CTATGGAAGC CTCAACTTAC AAAAATGATG AGATTGTGAA GGAGTGCGTC TCACCATTCC GGAGGGGTAG TTCCTTCTCG TACCTCAATA GCGACACTCC TGTTTTCTCA TTCTACTTCT TATCTGACTT CGCATTTTTT TTGGTCTCTC TGGAGTAGTG ATGAGTTCAG GAAGTCCTTT AAGGAAGACC ATCCCGAGGC CAAGGGTGTC GCTGTGGTAC GTGCAGATAC TCGTCCAAGC AGAATGAAGT TATATCAGAT CTTTATTCGT GCTCAGTGGT TATATCTTTT CCTCACTTGA AGTAGTTCTT GTGACACTCC CATATTTTTT TCTGTGCACA GGTTGGCAAA GCCGGAGGAG AGAAATGGAA AGACATGTCC GAATTCGTAA GTTCTCCTCT TTTGGCATTT TTTCTCATGA GTTGACTAGT TGAAATATTC AGGTCTCTTT GTGTGCGTAG AAATAACTGT CTCGAAATGG ACTTTTCAGG AGAAGGCTCC CTACATTGCC AAGGCCCAAC AGAAGAAGCA GGAGTATGAT AAGTCCATGT CAGCATACAA CAAGCAAAAG CAGGTACTGG TTAATGCTTT ATGTTCCTCC AGCTAATGCT ACCCCACTAC ACTGTCTGCC AGTAACATTC CTCCCACCAA CTGTCTCTAT CCCTAACTCC AGTTCCAAAT CAAGCACCCT GTTTTACGCT CCTTGCTACC TCTACAGAGA ATGCCTTGGC TTCTCCTTCT CATTGTATTC GACGTTTTGA TGCTCTTCAA TCTGAAGAGC AAACTGTTGT AATCCTTAGT TGTGTAATCC CCGCGAGCGC TTGGTTCCTC CCATCTGGAG AAGGGCCTTA TTTAATTAGG TCAGTTTTAC ATCGCAACTG GTACAACCCT CTAACCGTTT ATTGTCAACT GATATCAGGA CGATGAAGAG GACGACGAGG GAACACCTGA GGAATCGGAT AAGTCAAAGC AATCCGAAAT CAATGACGAT GATGAGGAGG CGTCAGAGGT AAAAAGTGCT ACCTGGACGG ATTGTTCTTT CACACTAGAA ATGTACAACA ACTAAGTCTA CATTTTAAAA AATCGTCTCA CCATCCAGAA TTTCCATGCG ATACAGGAGG AGGATGACGA TATGGACGAT TAGTCTTGCC ACCTAATCAA TATCTGCAGT GTTAGGTGAG TCCACCTCTG CCTTTTAATG GTTATATTAT CGTGCATCGA TTGAAATGTT GATGATTATG TGTCCTTGGA ATAGATGGAA CGAAGAATAC TGGGAAGAGA ATACATTTCA AAGTTTGCGC AACTGCTGGG ACTAACTTTT AAAAGGAAAT GTTCTCTCAA GCCCCTCTCT TTGTTAATGT TTTCCGTTTT TTCTCCTGTG CAGGATAGAA AGGAAGACCT GCCTATTCAG GAGAGTTGAC CATCAACTCG TTTTGTAAAT GCATTTCAGA TCGTACGTTG GGCTAGAGCA CTGAAGTCAG TAATTTGTCA GAAGTAGGCG TAGTGAAGGT CATTGTACAT TAGAAGTAGT GGTGGTTTGA TACTGTATCA GTCTTGATAG ACACGCGTAT CATGCACAAT ATGCCATGCC TTCGGAGCGG AGACCTGAAA AGTGCATCTC AGGGTCTTAA CTCCTCTGAA GCATGTTTAA CCTGTTCGAG CTATCTGGGT CATCTGTGTC AAATGTAATG GCTGGTTATG TGCATGGAGA GAACTATTCA GTTGCAAAGG TTTATTCTTA GCACAGGAGC CATCAATCTT TTTGCAGAGT TGGTTGGATG TGCATGATCC ATGTGCCCAA TGTGAACGGA GCATGTGTCC TTACTCTTGT GGCTTAAATT CATTTGTGAA AGCTTTAGAG CTTTTTCTGA AATAAATTGA GCCATTTTCA GTTT |
mRNA UTR + CDS |
>Mapoly0013s0048.1 CGAGAGTAAT CTTTCAGTAG GCGTTAAACG TGTCTCTCTG CTGTCGGAGC TCTTCACCTT GTGTACGCCT GTTCAAGAAG CGTATGATCT CCATATTGCT TTGACAGTTT GACGACTTGT TTACGTTTCT GAAGTTCGTA GCGCTGTCCA ATCCTTTTTT TAATAATTGG ACTCGTTTGT TGTGCTTTAG GCCAACAGAA CTCTCTCTAA GAGAGTTTTC TTGGTCTTGT TCCGATGGTA GACGACGGTT ATGCCGTCAG AGTTGCGTAA GTTTATTTTT TGAGCCATGA TGTGTCCTTT TTTTCGATTC AGGTGTGACT TGCCTGTATT TGAAGACTCT CGGAATTTGC TGCCATTCCG GGCTGAGTTT CCGTCTGTGG AGCGATGCTC AGTTTGATGA ATACTAGTTG CATAACGAGT GTCCGCACCC GATACCACGC CGGCTCTGCG TGCTCGCTCG TCGCGCATGC ATTCTTGTTC GTCTATTCTC ACTGATTGGA GTTTTCATGT GCAGCGTACT CTGAGCCTTT ACAATGAAGG ATACGGGGAA GGCGAAGAAA GGGGCGAACA CGCGGGTTGT GAAAGAGAAG ACTAGCAAAG TTGTAGACAA GGATATAAAG AAGCGTAAGG CTGTTGTCAA AGACGCCAAG CCAAAGAAGC AACGGAAGTC AAAGAAGGCG ACGAAAGCTG CGAAGGACCC GAACCAACCG AAGAGGCCAC CAACTGCCTT CTTCATCTTT CTTGATGAGT TCAGGAAGTC CTTTAAGGAA GACCATCCCG AGGCCAAGGG TGTCGCTGTG GTTGGCAAAG CCGGAGGAGA GAAATGGAAA GACATGTCCG AATTCGAGAA GGCTCCCTAC ATTGCCAAGG CCCAACAGAA GAAGCAGGAG TATGATAAGT CCATGTCAGC ATACAACAAG CAAAAGCAGG ACGATGAAGA GGACGACGAG GGAACACCTG AGGAATCGGA TAAGTCAAAG CAATCCGAAA TCAATGACGA TGATGAGGAG GCGTCAGAGG AGGAGGATGA CGATATGGAC GATTAGTCTT GCCACCTAAT CAATATCTGC AGTGTTAGGA TAGAAAGGAA GACCTGCCTA TTCAGGAGAG TTGACCATCA ACTCGTTTTG TAAATGCATT TCAGATCGTA CGTTGGGCTA GAGCACTGAA GTCAGTAATT TGTCAGAAGT AGGCGTAGTG AAGGTCATTG TACATTAGAA GTAGTGGTGG TTTGATACTG TATCAGTCTT GATAGACACG CGTATCATGC ACAATATGCC ATGCCTTCGG AGCGGAGACC TGAAAAGTGC ATCTCAGGGT CTTAACTCCT CTGAAGCATG TTTAACCTGT TCGAGCTATC TGGGTCATCT GTGTCAAATG TAATGGCTGG TTATGTGCAT GGAGAGAACT ATTCAGTTGC AAAGGTTTAT TCTTAGCACA GGAGCCATCA ATCTTTTTGC AGAGTTGGTT GGATGTGCAT GATCCATGTG CCCAATGTGA ACGGAGCATG TGTCCTTACT CTTGTGGCTT AAATTCATTT GTGAAAGCTT TAGAGCTTTT TCTGAAATAA ATTGAGCCAT TTTCAGTTT |
CDS |
>Mapoly0013s0048.1 ATGAAGGATA CGGGGAAGGC GAAGAAAGGG GCGAACACGC GGGTTGTGAA AGAGAAGACT AGCAAAGTTG TAGACAAGGA TATAAAGAAG CGTAAGGCTG TTGTCAAAGA CGCCAAGCCA AAGAAGCAAC GGAAGTCAAA GAAGGCGACG AAAGCTGCGA AGGACCCGAA CCAACCGAAG AGGCCACCAA CTGCCTTCTT CATCTTTCTT GATGAGTTCA GGAAGTCCTT TAAGGAAGAC CATCCCGAGG CCAAGGGTGT CGCTGTGGTT GGCAAAGCCG GAGGAGAGAA ATGGAAAGAC ATGTCCGAAT TCGAGAAGGC TCCCTACATT GCCAAGGCCC AACAGAAGAA GCAGGAGTAT GATAAGTCCA TGTCAGCATA CAACAAGCAA AAGCAGGACG ATGAAGAGGA CGACGAGGGA ACACCTGAGG AATCGGATAA GTCAAAGCAA TCCGAAATCA ATGACGATGA TGAGGAGGCG TCAGAGGAGG AGGATGACGA TATGGACGAT TAG |
Protein |
>Mapoly0013s0048.1 MKDTGKAKKG ANTRVVKEKT SKVVDKDIKK RKAVVKDAKP KKQRKSKKAT KAAKDPNQPK RPPTAFFIFL DEFRKSFKED HPEAKGVAVV GKAGGEKWKD MSEFEKAPYI AKAQQKKQEY DKSMSAYNKQ KQDDEEDDEG TPEESDKSKQ SEINDDDEEA SEEEDDDMDD |