HMG (high mobility group) box
Database | ID | Description |
---|---|---|
PFAM | PF00505 | HMG (high mobility group) box |
Gene symbol | Product | Transcript ID | Status |
---|---|---|---|
MpHMGBOX5 | transcription factor, HMG-box | Published |
Sequences: |
Gene UTR + CDS + intron |
>Mapoly0051s0025.1 TGGACAGGCT ATAGTCATGG AAGAACAGGC AGCCACTATA ATCATCTCGG ACGTCCCGGA AGAGAAAAAG GTGCCTGCAG AGAAAGAGGG AAGTGTCGGA AAATTAGTCA AGCTCAGGGC CTTCAATCTC TTCGCCTCTA AGATCCGGGA CACAATCAAG GATGAAAATC CAGTCGCCAA CGGCCATGAA ATCAAGCGCA TTGTTGGTCA GAAGTGGGCC AAGTTAGGCA ACCAGGACAA ACAGGAGTAT ATTGACGTGG CTCAGAATGA AACCGATCTG CTGGGCCAGA TGCCGGTGGA TCCCAATGCA CCCAAGCGGA GGCGACGAAG GCGAACCAAA GCTGAAATTG AACTCGATGA CGGTTCTGGT TTTCCGAAGA AAAGAAGGGG GAGACCACGG AAAAACGGTG ATGCAATGAG AGGAGAGGTC AGCAATGGGA CTGTGCCATC AAATGGAGAT GGACAACCCA AACGAAGGAG AATGCGTAAG CAGGGGGACG CATCAGGCAA AGCTGTAGAT CCAGCCTTTG TTGGCAAATG TGTAAGTGGG ACAGTGGATG GCTCTTTTGA TGCAGGGTAT CTGGTCACTG TAAGGGTGGG AGACACTGAT ATGGTCTTCC GTGGGGTACT TTTTGAACCA TCAATTGCCA TGCCTCCTAA CAACACCAAC GATGTGGCCC CAAATGTAAA ATTAGTTAGA AGGAACGACG GCATTGTCTT CCCTTCTACA GGTCCCATGC ATAGCAGTTC AGGGCCTGCT TCTTCATCGA AGCAGATGCT TGGGGGTCCT ATGCATTCAG CCGGGACCGT CGTCTAACTG AATGGTTCTT TCTCGAACGC TTGTATGTGG TACAATCATG ATGTTTAGGA TCCCTTTACT TTACAGCCCA GGCATTGGCT AACTGCTGAT CTAGCTGTCA CTCGACCTCG GTTCGACCCC AAGTTCATGC TGGATGGAGT TCGGCCCCCA CCAATGCAGG AAGAGTCCGG TATGTTGTAA ATTAGAAAGG ACTTCCTTTC AAAAACTCGC TCACTTGTCC ATAAAATTGC TTGTAACTTC GATCGCGTAG TAAAGGAAAC GCCCAAACAG TTTTTTTGCT AATAAATAGG TTCGATCCTC GTCATTGCAC TTTTCTTATT GTTATCCGGA TTGCGTTATT ATGTCATTGT ACTGATAGCT TTTTATTTAT ACATCTTCAT ATGGTACTAG GAGCTCGTAG TTTTTACAGG TAAGGTTCCT AAGGTTCTTC ATATCTGGTG TCGGAATTCT CCCGAAATTT ATTCTTTAGA ATACCTTTCC TAAATTGTTC |
mRNA UTR + CDS |
>Mapoly0051s0025.1 TGGACAGGCT ATAGTCATGG AAGAACAGGC AGCCACTATA ATCATCTCGG ACGTCCCGGA AGAGAAAAAG GTGCCTGCAG AGAAAGAGGG AAGTGTCGGA AAATTAGTCA AGCTCAGGGC CTTCAATCTC TTCGCCTCTA AGATCCGGGA CACAATCAAG GATGAAAATC CAGTCGCCAA CGGCCATGAA ATCAAGCGCA TTGTTGGTCA GAAGTGGGCC AAGTTAGGCA ACCAGGACAA ACAGGAGTAT ATTGACGTGG CTCAGAATGA AACCGATCTG CTGGGCCAGA TGCCGGTGGA TCCCAATGCA CCCAAGCGGA GGCGACGAAG GCGAACCAAA GCTGAAATTG AACTCGATGA CGGTTCTGGT TTTCCGAAGA AAAGAAGGGG GAGACCACGG AAAAACGGTG ATGCAATGAG AGGAGAGGTC AGCAATGGGA CTGTGCCATC AAATGGAGAT GGACAACCCA AACGAAGGAG AATGCGTAAG CAGGGGGACG CATCAGGCAA AGCTGTAGAT CCAGCCTTTG TTGGCAAATG TGTAAGTGGG ACAGTGGATG GCTCTTTTGA TGCAGGGTAT CTGGTCACTG TAAGGGTGGG AGACACTGAT ATGGTCTTCC GTGGGGTACT TTTTGAACCA TCAATTGCCA TGCCTCCTAA CAACACCAAC GATGTGGCCC CAAATGTAAA ATTAGTTAGA AGGAACGACG GCATTGTCTT CCCTTCTACA GGTCCCATGC ATAGCAGTTC AGGGCCTGCT TCTTCATCGA AGCAGATGCT TGGGGGTCCT ATGCATTCAG CCGGGACCGT CGTCTAACTG AATGGTTCTT TCTCGAACGC TTGTATGTGG TACAATCATG ATGTTTAGGA TCCCTTTACT TTACAGCCCA GGCATTGGCT AACTGCTGAT CTAGCTGTCA CTCGACCTCG GTTCGACCCC AAGTTCATGC TGGATGGAGT TCGGCCCCCA CCAATGCAGG AAGAGTCCGG TATGTTGTAA ATTAGAAAGG ACTTCCTTTC AAAAACTCGC TCACTTGTCC ATAAAATTGC TTGTAACTTC GATCGCGTAG TAAAGGAAAC GCCCAAACAG TTTTTTTGCT AATAAATAGG TTCGATCCTC GTCATTGCAC TTTTCTTATT GTTATCCGGA TTGCGTTATT ATGTCATTGT ACTGATAGCT TTTTATTTAT ACATCTTCAT ATGGTACTAG GAGCTCGTAG TTTTTACAGG TAAGGTTCCT AAGGTTCTTC ATATCTGGTG TCGGAATTCT CCCGAAATTT ATTCTTTAGA ATACCTTTCC TAAATTGTTC |
CDS |
>Mapoly0051s0025.1 ATGGAAGAAC AGGCAGCCAC TATAATCATC TCGGACGTCC CGGAAGAGAA AAAGGTGCCT GCAGAGAAAG AGGGAAGTGT CGGAAAATTA GTCAAGCTCA GGGCCTTCAA TCTCTTCGCC TCTAAGATCC GGGACACAAT CAAGGATGAA AATCCAGTCG CCAACGGCCA TGAAATCAAG CGCATTGTTG GTCAGAAGTG GGCCAAGTTA GGCAACCAGG ACAAACAGGA GTATATTGAC GTGGCTCAGA ATGAAACCGA TCTGCTGGGC CAGATGCCGG TGGATCCCAA TGCACCCAAG CGGAGGCGAC GAAGGCGAAC CAAAGCTGAA ATTGAACTCG ATGACGGTTC TGGTTTTCCG AAGAAAAGAA GGGGGAGACC ACGGAAAAAC GGTGATGCAA TGAGAGGAGA GGTCAGCAAT GGGACTGTGC CATCAAATGG AGATGGACAA CCCAAACGAA GGAGAATGCG TAAGCAGGGG GACGCATCAG GCAAAGCTGT AGATCCAGCC TTTGTTGGCA AATGTGTAAG TGGGACAGTG GATGGCTCTT TTGATGCAGG GTATCTGGTC ACTGTAAGGG TGGGAGACAC TGATATGGTC TTCCGTGGGG TACTTTTTGA ACCATCAATT GCCATGCCTC CTAACAACAC CAACGATGTG GCCCCAAATG TAAAATTAGT TAGAAGGAAC GACGGCATTG TCTTCCCTTC TACAGGTCCC ATGCATAGCA GTTCAGGGCC TGCTTCTTCA TCGAAGCAGA TGCTTGGGGG TCCTATGCAT TCAGCCGGGA CCGTCGTCTA A |
Protein |
>Mapoly0051s0025.1 MEEQAATIII SDVPEEKKVP AEKEGSVGKL VKLRAFNLFA SKIRDTIKDE NPVANGHEIK RIVGQKWAKL GNQDKQEYID VAQNETDLLG QMPVDPNAPK RRRRRRTKAE IELDDGSGFP KKRRGRPRKN GDAMRGEVSN GTVPSNGDGQ PKRRRMRKQG DASGKAVDPA FVGKCVSGTV DGSFDAGYLV TVRVGDTDMV FRGVLFEPSI AMPPNNTNDV APNVKLVRRN DGIVFPSTGP MHSSSGPASS SKQMLGGPMH SAGTVV |