PPR repeat // PPR repeat family
Database | ID | Description |
---|---|---|
PANTHER | PTHR24015:SF425 | |
PFAM | PF01535 | PPR repeat |
PANTHER | PTHR24015 | FAMILY NOT NAMED |
PFAM | PF13041 | PPR repeat family |
Gene symbol | Product | Transcript ID | Status |
---|---|---|---|
MpPPR_58 | Pentatricopeptide repeat proteins | Published |
Sequences: |
Gene UTR + CDS + intron |
>Mapoly0147s0011.1 GATGGAGCCG GTCATCTTAA TGATATAACC TTTTAACTAT GAGTTCGATG GAGATAACCA TGAATATACA ATTTTCTTCA TTTCGTCCTT CCGTGCGAAA AGAACTTCAC TTCAATGTGG TTTCCTTCGT TTCTCGACCG TCTATGGTTT GCTTTTGTTC GAAAAGTCGG AGTGGAAAGA AAAGAGCCAG TTTCCATGCT GCCTCCGTAA TACTTCAAGT GGATCGCGCA AGATTGCAAG ATCTTCAGAA GTTGCATCGA ACGCAAGCTA GGCTTCTACC ACAAGCTGTG ATTGAAGAGC TATATCAACG GATTAAAGCC AACCAATGGA AAGAAGCCTT GAAGGTTTTT GAGTTACTGC GCATGCAAGA ATGGTACGAG CCCAAGCACG AACAGTATGT CAGCGTTCTG ACAATGCTGG CAAAAAACAG ACAGCCCGAA CATGCTGAAG ACATCTTAAG AACGATGCTG GAGGAGAAGT TACCACCTTC AGTCGAAGCT TACACCGCTT TGCTGTCAGC TTTCGTGGAA TTCGGGGATC TAGACAGAGC CGTATCCATA TTCAATGATA TGAAGACACA GGGAGATTGT CCTCCTGATG TATACACCTA TTCGAAGTTG ATTGATGGAT TCTGCAGAGC AAAGGAGCTG TCCAAGGCTT TGGAGTTAGT GGAGGAGATG GAGCGCAATG ATGTTCCTGC AAATACAGTA ACGTACAATG CGATCCTCAA AGCTGTAGGG GAGACGGAAC CTCTTGAGGT GATGGAAGAT ATTTTTGAAC ACATGATGAA GAGCTCTACG TGCCCTCCCG ACAATTGGTC ATTCAACATT CTGCTCAAAG CCTTGGGAAC GCGAGGAAGT ATAGAGAAGA TGGAGGAGTG GTATCTCAGA ATGAGTGAAG TCGACGTCGC ACCGAACATC GTGACGATGA ACACCCTGAT TCATTGCTAC GGCCTTCAGC AGCACTTTCA CAAGATGGAG AGGGTCCTAA ACCACATGGA TAGAATGTAT TTTTCGTGCA ACGAATTTAC ATACAATTCC ATGATAAGAG CTTATGGGAA CGCGCAAAGA ATATCAGACA TGGAAAGGAT GTACTTCGTC ATGAAGCAGA GCGGAGTTAA ACCCACAGCC TACACTTTAA CATTGATCAT CACTGCTCTT ACGAAGGCTA GAATGTGGCA CAGAATCGAA AAGGTTCGTA ATGAGTGGAC AAACTCTGAC TTACGCCCCG ACGTCTACCT ATACAACGCC CTGTTGAATG CGTATGCTCA GTCCGAAAAT CTTCATATGG TACAGGAGAC ATTCGAAGAG TTGTTGCAAA ACGTGGAGCC CGACGACGTC ACAGAGTCCA TTTTGGCTAG AGCTTATGAG GGTCACGGCC ACAAGAGGTT GTCGGTCTCG AAAAAAGATA ATGCGAATGA CTTGTAAGCT CATAGTGGCT TCGCCACTGT GAGTTGGATA CGCAGGCAGG CTCTCAATGC CCACTGAAGA TCATGTGAAA ATCTTTTGAG GTCAAAGTTG TTATTCCTCC AGAGTCATGT CATTTTGTTC CAGGTGATGA TCTATAGGCC ATCAGGTTGT CAAGTGCTTC CGACTTTGAT ACTCAAAAAC TGTGTATAGT TTAGCGCTTT AGAGAAGACC CTGTGATTCA ATTGTTGTAG ATTTTCTTGC ATAGTTCGAC ATATACTTGT AGCTGAGCTC AGGCTGGGTT GCCATGTTTG CTGAGCTTGG TCCTGTTACT TCAGGGCCAT AGTGGTGGCT TTTCCCATCC TACGCAAACC GGCATCATTT TAAACCTCTG GCTTTAGTTT CCTTCTGCGC CTATACTCTA TCAATTGGCT CGGTCCATGT CAATTGGTTG TACGTCACTA ACCGTGCCGT TTCCTTCTTG TAAAGTTTTA GGCTTTACAA GAGATTAGAA ATTAAGTCAT TGGATTGTTG TTACGCACTG GAGCCCGCAT TGTATGTTTC TCCAATGTAA GGTTGGATAT GAGTTTCTTT CAATACTTTG GATAGTTGTC CACATTGTCA GAACATTTTG GAAAGCAGCT GCTCTAGGG |
mRNA UTR + CDS |
>Mapoly0147s0011.1 GATGGAGCCG GTCATCTTAA TGATATAACC TTTTAACTAT GAGTTCGATG GAGATAACCA TGAATATACA ATTTTCTTCA TTTCGTCCTT CCGTGCGAAA AGAACTTCAC TTCAATGTGG TTTCCTTCGT TTCTCGACCG TCTATGGTTT GCTTTTGTTC GAAAAGTCGG AGTGGAAAGA AAAGAGCCAG TTTCCATGCT GCCTCCGTAA TACTTCAAGT GGATCGCGCA AGATTGCAAG ATCTTCAGAA GTTGCATCGA ACGCAAGCTA GGCTTCTACC ACAAGCTGTG ATTGAAGAGC TATATCAACG GATTAAAGCC AACCAATGGA AAGAAGCCTT GAAGGTTTTT GAGTTACTGC GCATGCAAGA ATGGTACGAG CCCAAGCACG AACAGTATGT CAGCGTTCTG ACAATGCTGG CAAAAAACAG ACAGCCCGAA CATGCTGAAG ACATCTTAAG AACGATGCTG GAGGAGAAGT TACCACCTTC AGTCGAAGCT TACACCGCTT TGCTGTCAGC TTTCGTGGAA TTCGGGGATC TAGACAGAGC CGTATCCATA TTCAATGATA TGAAGACACA GGGAGATTGT CCTCCTGATG TATACACCTA TTCGAAGTTG ATTGATGGAT TCTGCAGAGC AAAGGAGCTG TCCAAGGCTT TGGAGTTAGT GGAGGAGATG GAGCGCAATG ATGTTCCTGC AAATACAGTA ACGTACAATG CGATCCTCAA AGCTGTAGGG GAGACGGAAC CTCTTGAGGT GATGGAAGAT ATTTTTGAAC ACATGATGAA GAGCTCTACG TGCCCTCCCG ACAATTGGTC ATTCAACATT CTGCTCAAAG CCTTGGGAAC GCGAGGAAGT ATAGAGAAGA TGGAGGAGTG GTATCTCAGA ATGAGTGAAG TCGACGTCGC ACCGAACATC GTGACGATGA ACACCCTGAT TCATTGCTAC GGCCTTCAGC AGCACTTTCA CAAGATGGAG AGGGTCCTAA ACCACATGGA TAGAATGTAT TTTTCGTGCA ACGAATTTAC ATACAATTCC ATGATAAGAG CTTATGGGAA CGCGCAAAGA ATATCAGACA TGGAAAGGAT GTACTTCGTC ATGAAGCAGA GCGGAGTTAA ACCCACAGCC TACACTTTAA CATTGATCAT CACTGCTCTT ACGAAGGCTA GAATGTGGCA CAGAATCGAA AAGGTTCGTA ATGAGTGGAC AAACTCTGAC TTACGCCCCG ACGTCTACCT ATACAACGCC CTGTTGAATG CGTATGCTCA GTCCGAAAAT CTTCATATGG TACAGGAGAC ATTCGAAGAG TTGTTGCAAA ACGTGGAGCC CGACGACGTC ACAGAGTCCA TTTTGGCTAG AGCTTATGAG GGTCACGGCC ACAAGAGGTT GTCGGTCTCG AAAAAAGATA ATGCGAATGA CTTGTAAGCT CATAGTGGCT TCGCCACTGT GAGTTGGATA CGCAGGCAGG CTCTCAATGC CCACTGAAGA TCATGTGAAA ATCTTTTGAG GTCAAAGTTG TTATTCCTCC AGAGTCATGT CATTTTGTTC CAGGTGATGA TCTATAGGCC ATCAGGTTGT CAAGTGCTTC CGACTTTGAT ACTCAAAAAC TGTGTATAGT TTAGCGCTTT AGAGAAGACC CTGTGATTCA ATTGTTGTAG ATTTTCTTGC ATAGTTCGAC ATATACTTGT AGCTGAGCTC AGGCTGGGTT GCCATGTTTG CTGAGCTTGG TCCTGTTACT TCAGGGCCAT AGTGGTGGCT TTTCCCATCC TACGCAAACC GGCATCATTT TAAACCTCTG GCTTTAGTTT CCTTCTGCGC CTATACTCTA TCAATTGGCT CGGTCCATGT CAATTGGTTG TACGTCACTA ACCGTGCCGT TTCCTTCTTG TAAAGTTTTA GGCTTTACAA GAGATTAGAA ATTAAGTCAT TGGATTGTTG TTACGCACTG GAGCCCGCAT TGTATGTTTC TCCAATGTAA GGTTGGATAT GAGTTTCTTT CAATACTTTG GATAGTTGTC CACATTGTCA GAACATTTTG GAAAGCAGCT GCTCTAGGG |
CDS |
>Mapoly0147s0011.1 ATGAGTTCGA TGGAGATAAC CATGAATATA CAATTTTCTT CATTTCGTCC TTCCGTGCGA AAAGAACTTC ACTTCAATGT GGTTTCCTTC GTTTCTCGAC CGTCTATGGT TTGCTTTTGT TCGAAAAGTC GGAGTGGAAA GAAAAGAGCC AGTTTCCATG CTGCCTCCGT AATACTTCAA GTGGATCGCG CAAGATTGCA AGATCTTCAG AAGTTGCATC GAACGCAAGC TAGGCTTCTA CCACAAGCTG TGATTGAAGA GCTATATCAA CGGATTAAAG CCAACCAATG GAAAGAAGCC TTGAAGGTTT TTGAGTTACT GCGCATGCAA GAATGGTACG AGCCCAAGCA CGAACAGTAT GTCAGCGTTC TGACAATGCT GGCAAAAAAC AGACAGCCCG AACATGCTGA AGACATCTTA AGAACGATGC TGGAGGAGAA GTTACCACCT TCAGTCGAAG CTTACACCGC TTTGCTGTCA GCTTTCGTGG AATTCGGGGA TCTAGACAGA GCCGTATCCA TATTCAATGA TATGAAGACA CAGGGAGATT GTCCTCCTGA TGTATACACC TATTCGAAGT TGATTGATGG ATTCTGCAGA GCAAAGGAGC TGTCCAAGGC TTTGGAGTTA GTGGAGGAGA TGGAGCGCAA TGATGTTCCT GCAAATACAG TAACGTACAA TGCGATCCTC AAAGCTGTAG GGGAGACGGA ACCTCTTGAG GTGATGGAAG ATATTTTTGA ACACATGATG AAGAGCTCTA CGTGCCCTCC CGACAATTGG TCATTCAACA TTCTGCTCAA AGCCTTGGGA ACGCGAGGAA GTATAGAGAA GATGGAGGAG TGGTATCTCA GAATGAGTGA AGTCGACGTC GCACCGAACA TCGTGACGAT GAACACCCTG ATTCATTGCT ACGGCCTTCA GCAGCACTTT CACAAGATGG AGAGGGTCCT AAACCACATG GATAGAATGT ATTTTTCGTG CAACGAATTT ACATACAATT CCATGATAAG AGCTTATGGG AACGCGCAAA GAATATCAGA CATGGAAAGG ATGTACTTCG TCATGAAGCA GAGCGGAGTT AAACCCACAG CCTACACTTT AACATTGATC ATCACTGCTC TTACGAAGGC TAGAATGTGG CACAGAATCG AAAAGGTTCG TAATGAGTGG ACAAACTCTG ACTTACGCCC CGACGTCTAC CTATACAACG CCCTGTTGAA TGCGTATGCT CAGTCCGAAA ATCTTCATAT GGTACAGGAG ACATTCGAAG AGTTGTTGCA AAACGTGGAG CCCGACGACG TCACAGAGTC CATTTTGGCT AGAGCTTATG AGGGTCACGG CCACAAGAGG TTGTCGGTCT CGAAAAAAGA TAATGCGAAT GACTTGTAA |
Protein |
>Mapoly0147s0011.1 MSSMEITMNI QFSSFRPSVR KELHFNVVSF VSRPSMVCFC SKSRSGKKRA SFHAASVILQ VDRARLQDLQ KLHRTQARLL PQAVIEELYQ RIKANQWKEA LKVFELLRMQ EWYEPKHEQY VSVLTMLAKN RQPEHAEDIL RTMLEEKLPP SVEAYTALLS AFVEFGDLDR AVSIFNDMKT QGDCPPDVYT YSKLIDGFCR AKELSKALEL VEEMERNDVP ANTVTYNAIL KAVGETEPLE VMEDIFEHMM KSSTCPPDNW SFNILLKALG TRGSIEKMEE WYLRMSEVDV APNIVTMNTL IHCYGLQQHF HKMERVLNHM DRMYFSCNEF TYNSMIRAYG NAQRISDMER MYFVMKQSGV KPTAYTLTLI ITALTKARMW HRIEKVRNEW TNSDLRPDVY LYNALLNAYA QSENLHMVQE TFEELLQNVE PDDVTESILA RAYEGHGHKR LSVSKKDNAN DL |