Mp1g04330



Description

Annotation

Database ID Description
KEGG K06674 structural maintenance of chromosome 2
KOG KOG0933 Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin, subunit E); [BD]
Gene3D G3DSA:3.30.70.1620 -
SUPERFAMILY SSF75553 Smc hinge domain
PANTHER PTHR43977:SF2 STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
PANTHER PTHR43977 STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 3
Coils Coil Coil
SMART SM00968 SMC_hinge_2
Pfam PF06470 SMC proteins Flexible Hinge Domain
Pfam PF02463 RecF/RecN/SMC N terminal domain
Gene3D G3DSA:1.20.1060.20 -
CDD cd03273 ABC_SMC2_euk
PIRSF PIRSF005719 SMC
Gene3D G3DSA:3.40.50.300 -
MapolyID Mapoly0005s0174 -

Nomenclature

Gene symbol Product Transcript ID Status
MpSMC2 Chromatin related protein Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g04330.1 chr1:4670384..4679784 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g04330.2 chr1:4670384..4679685 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g04330.3 chr1:4670384..4679685 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.