Mp1g06750



Description

Annotation

Database ID Description
KEGG K12811 ATP-dependent RNA helicase DDX46/PRP5 [EC:3.6.4.13]
KOG KOG0334 RNA helicase; [A]
KOG KOG4676 Splicing factor, arginine/serine-rich; N-term missing; C-term missing; [A]
ProSiteProfiles PS51194 Superfamilies 1 and 2 helicase C-terminal domain profile.
Coils Coil Coil
MobiDBLite mobidb-lite consensus disorder prediction
SMART SM00490 helicmild6
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
Gene3D G3DSA:3.40.50.300 -
CDD cd17953 DEADc_DDX46
Pfam PF00270 DEAD/DEAH box helicase
PANTHER PTHR47958 ATP-DEPENDENT RNA HELICASE DBP3
ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature.
ProSiteProfiles PS51195 DEAD-box RNA helicase Q motif profile.
PANTHER PTHR47958:SF35 LOW QUALITY PROTEIN: DEAD-BOX ATP-DEPENDENT RNA HELICASE 42-LIKE
CDD cd18787 SF2_C_DEAD
SMART SM00487 ultradead3
Pfam PF00271 Helicase conserved C-terminal domain
ProSiteProfiles PS51192 Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile.
MapolyID Mapoly0043s0067 -

Nomenclature

Gene symbol Product Transcript ID Status
MpRH42 ATP-dependent RNA helicase Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g06750.1 chr1:7118615..7125314 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g06750.2 chr1:7118615..7125012 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.