Mp1g09040



Description

Annotation

Database ID Description
KEGG K17943 pumilio RNA-binding family
KOG KOG2049 Translational repressor MPT5/PUF4 and related RNA-binding proteins (Puf superfamily); N-term missing; [J]
KOG KOG2057 Predicted equilibrative nucleoside transporter protein; N-term missing; [F]
Pfam PF18345 Zinc finger domain
SMART SM00356 c3hfinal6
MobiDBLite mobidb-lite consensus disorder prediction
ProSiteProfiles PS50303 Pumilio homology domain (PUM-HD) profile.
ProSiteProfiles PS50302 Pumilio RNA-binding repeat profile.
PANTHER PTHR12537:SF147 PUMILIO HOMOLOG 12
ProSiteProfiles PS50103 Zinc finger C3H1-type profile.
Pfam PF00806 Pumilio-family RNA binding repeat
SUPERFAMILY SSF90229 CCCH zinc finger
SUPERFAMILY SSF48371 ARM repeat
Gene3D G3DSA:4.10.1000.10 CCCH zinc finger
CDD cd07920 Pumilio
PANTHER PTHR12537 RNA BINDING PROTEIN PUMILIO-RELATED
SMART SM00025 pum_5
Gene3D G3DSA:1.25.10.10 -
MapolyID Mapoly0036s0144 -

Nomenclature

Gene symbol Product Transcript ID Status
MpC3H5 transcription factor, C3H Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g09040.1 chr1:9369695..9376480 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.