Mp3g22400



Description

Annotation

Database ID Description
KEGG K12891 serine/arginine-rich splicing factor 2/8
KOG KOG4207 Predicted splicing factor, SR protein superfamily; [A]
MobiDBLite mobidb-lite consensus disorder prediction
PANTHER PTHR23147:SF161 OS08G0486200 PROTEIN
PANTHER PTHR23147 SERINE/ARGININE RICH SPLICING FACTOR
SUPERFAMILY SSF54928 RNA-binding domain, RBD
Gene3D G3DSA:3.30.70.330 -
ProSiteProfiles PS50102 Eukaryotic RNA Recognition Motif (RRM) profile.
Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
SMART SM00360 rrm1_1
MapolyID Mapoly0024s0018 -

Nomenclature

Gene symbol Product Transcript ID Status
MpSR2 SR proteins, RNA-splicing Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp3g22400.1 chr3:23513749..23520199 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp3g22400.2 chr3:23513612..23520220 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp3g22400.3 chr3:23513627..23520220 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.