Mp3g23400



Description

Annotation

Database ID Description
KEGG K03231 elongation factor 1-alpha
KOG KOG0052 Translation elongation factor EF-1 alpha/Tu; [J]
Pfam PF03144 Elongation factor Tu domain 2
Gene3D G3DSA:3.40.50.300 -
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
CDD cd01883 EF1_alpha
PRINTS PR00315 GTP-binding elongation factor signature
TIGRFAM TIGR00483 EF-1_alpha: translation elongation factor EF-1, subunit alpha
CDD cd03705 EF1_alpha_III
ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature.
ProSiteProfiles PS51722 Translational (tr)-type guanine nucleotide-binding (G) domain profile.
PANTHER PTHR23115:SF263 ELONGATION FACTOR 1-ALPHA-LIKE
SUPERFAMILY SSF50465 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
Hamap MF_00118_A Elongation factor Tu [tuf].
Gene3D G3DSA:2.40.30.10 Translation factors
PANTHER PTHR23115 TRANSLATION FACTOR
SUPERFAMILY SSF50447 Translation proteins
Pfam PF03143 Elongation factor Tu C-terminal domain
Pfam PF00009 Elongation factor Tu GTP binding domain
CDD cd03693 EF1_alpha_II
MapolyID Mapoly0024s0116 -

Nomenclature

Gene symbol Product Transcript ID Status
MpEF1 Housekeeping Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp3g23400.1 chr3:24850565..24853018 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp3g23400.2 chr3:24850565..24852739 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.