Mp4g01470



Description

Annotation

Database ID Description
KOG KOG0947 Cytoplasmic exosomal RNA helicase SKI2, DEAD-box superfamily; [A]
SMART SM00487 ultradead3
CDD cd18795 SF2_C_Ski2
MobiDBLite mobidb-lite consensus disorder prediction
Gene3D G3DSA:1.20.1500.20 -
Gene3D G3DSA:3.40.50.300 -
Pfam PF08148 DSHCT (NUC185) domain
Coils Coil Coil
SMART SM01142 DSHCT_2
ProSiteProfiles PS51194 Superfamilies 1 and 2 helicase C-terminal domain profile.
Pfam PF00270 DEAD/DEAH box helicase
SMART SM00490 helicmild6
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
ProSiteProfiles PS51192 Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile.
PANTHER PTHR12131:SF19 DEXH-BOX ATP-DEPENDENT RNA HELICASE DEXH15 CHLOROPLASTIC
PANTHER PTHR12131 ATP-DEPENDENT RNA AND DNA HELICASE
Gene3D G3DSA:1.10.3380.30 -
MapolyID Mapoly0098s0053 -

Nomenclature

Gene symbol Product Transcript ID Status
MpISE2 Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp4g01470.1 chr4:1615059..1620421 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.