Mp4g01910



Description

Annotation

Database ID Description
KEGG K00801 farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21]
KOG KOG1459 Squalene synthetase; [I]
SUPERFAMILY SSF48576 Terpenoid synthases
Pfam PF00494 Squalene/phytoene synthase
ProSitePatterns PS01044 Squalene and phytoene synthases signature 1.
PANTHER PTHR11626 FARNESYL-DIPHOSPHATE FARNESYLTRANSFERASE
CDD cd00683 Trans_IPPS_HH
Gene3D G3DSA:1.10.600.10 Farnesyl Diphosphate Synthase
ProSitePatterns PS01045 Squalene and phytoene synthases signature 2.
SFLD SFLDS00005 Isoprenoid Synthase Type I
TIGRFAM TIGR01559 squal_synth: farnesyl-diphosphate farnesyltransferase
SFLD SFLDG01018 Squalene/Phytoene Synthase Like
MapolyID Mapoly0098s0008 -

Nomenclature

Gene symbol Product Transcript ID Status
MpSQS3 Secondary metabolism enzyme, Terpene biosynthesis enzymes Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp4g01910.1 chr4:2249047..2255300 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.