Mp4g02260



Description

Annotation

Database ID Description
KEGG K19307 25S rRNA (uracil2634-N3)-methyltransferase [EC:2.1.1.313]
KOG KOG0920 ATP-dependent RNA helicase A; C-term missing; [A]
KOG KOG1040 Polyadenylation factor I complex, subunit, Yth1 (CPSF subunit); C-term missing; [A]
KOG KOG4174 Uncharacterized conserved protein; N-term missing; [S]
SMART SM00490 helicmild6
Gene3D G3DSA:4.10.1000.10 CCCH zinc finger
PANTHER PTHR18934:SF221 DEXH-BOX ATP-DEPENDENT RNA HELICASE DEXH8
CDD cd18791 SF2_C_RHA
CDD cd17917 DEXHc_RHA-like
Pfam PF00271 Helicase conserved C-terminal domain
SUPERFAMILY SSF90229 CCCH zinc finger
Pfam PF10354 Domain of unknown function (DUF2431)
SMART SM00487 ultradead3
ProSiteProfiles PS51192 Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile.
ProSiteProfiles PS50103 Zinc finger C3H1-type profile.
PANTHER PTHR18934 ATP-DEPENDENT RNA HELICASE
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
Pfam PF00270 DEAD/DEAH box helicase
Pfam PF00642 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
Gene3D G3DSA:3.40.50.300 -
MobiDBLite mobidb-lite consensus disorder prediction
SMART SM00356 c3hfinal6
ProSiteProfiles PS51194 Superfamilies 1 and 2 helicase C-terminal domain profile.
MapolyID Mapoly0080s0073 -

Nomenclature

Gene symbol Product Transcript ID Status
MpC3H15 transcription factor, C3H Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp4g02260.1 chr4:2591541..2601227 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.