Mp5g04260



Description

Annotation

Database ID Description
KEGG K12795 suppressor of G2 allele of SKP1
KOG KOG1309 Suppressor of G2 allele of skp1; [T]
KOG KOG0548 Molecular co-chaperone STI1; C-term missing; [O]
MobiDBLite mobidb-lite consensus disorder prediction
ProSiteProfiles PS51203 CS domain profile.
Pfam PF04969 CS domain
Pfam PF13432 Tetratricopeptide repeat
Pfam PF05002 SGS domain
ProSiteProfiles PS51048 SGS domain profile.
Gene3D G3DSA:1.25.40.10 -
SUPERFAMILY SSF48452 TPR-like
ProSiteProfiles PS50005 TPR repeat profile.
ProSiteProfiles PS50293 TPR repeat region circular profile.
PANTHER PTHR45862:SF2 PROTEIN SGT1 HOMOLOG A
SMART SM00028 tpr_5
CDD cd06466 p23_CS_SGT1_like
PANTHER PTHR45862 PROTEIN SGT1 HOMOLOG
Gene3D G3DSA:2.60.40.790 -
SUPERFAMILY SSF49764 HSP20-like chaperones
MapolyID Mapoly0141s0033 -

Nomenclature

Gene symbol Product Transcript ID Status
MpSGT1 Disease resistance Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp5g04260.1 chr5:4754319..4759439 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp5g04260.2 chr5:4754319..4759439 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.