Mp5g06430



Description

Annotation

Database ID Description
KEGG K06675 structural maintenance of chromosome 4
KOG KOG0996 Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C); [BD]
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
Pfam PF02463 RecF/RecN/SMC N terminal domain
Coils Coil Coil
PANTHER PTHR43939:SF1 STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 4
PANTHER PTHR43939 -
SUPERFAMILY SSF75553 Smc hinge domain
Gene3D G3DSA:1.20.1060.20 -
Pfam PF06470 SMC proteins Flexible Hinge Domain
CDD cd03274 ABC_SMC4_euk
Gene3D G3DSA:3.30.70.1620 -
Gene3D G3DSA:3.40.50.300 -
MobiDBLite mobidb-lite consensus disorder prediction
SMART SM00968 SMC_hinge_2
PIRSF PIRSF005719 SMC
MapolyID Mapoly0189s0011 -

Nomenclature

Gene symbol Product Transcript ID Status
MpSMC4 Chromatin related protein Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp5g06430.1 chr5:6852511..6862800 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.