Mp5g15980



Description

Annotation

Database ID Description
KEGG K01648 ATP citrate (pro-S)-lyase [EC:2.3.3.8]
KOG KOG1254 ATP-citrate lyase; [C]
SUPERFAMILY SSF51735 NAD(P)-binding Rossmann-fold domains
Pfam PF00549 CoA-ligase
SUPERFAMILY SSF48256 Citrate synthase
Gene3D G3DSA:1.10.230.10 -
PANTHER PTHR23118 ATP-CITRATE SYNTHASE
ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1.
Gene3D G3DSA:1.10.580.10 Citrate Synthase
CDD cd06100 CCL_ACL-C
Gene3D G3DSA:3.40.50.261 -
Pfam PF00285 Citrate synthase, C-terminal domain
Gene3D G3DSA:3.40.50.720 -
PANTHER PTHR23118:SF37 ATP-CITRATE SYNTHASE BETA CHAIN PROTEIN 2-LIKE
ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site.
ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3.
MapolyID Mapoly0071s0012 -

Nomenclature

Gene symbol Product Transcript ID Status
MpCIS2 organic acid biosynthesis and exudation Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp5g15980.1 chr5:17032526..17034894 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.