Mp5g17980



Description

Annotation

Database ID Description
KEGG K01426 amidase [EC:3.5.1.4]
KOG KOG1211 Amidases; [J]
KOG KOG0548 Molecular co-chaperone STI1; N-term missing; [O]
SUPERFAMILY SSF75304 Amidase signature (AS) enzymes
ProSiteProfiles PS50005 TPR repeat profile.
Gene3D G3DSA:1.25.40.10 -
SMART SM00028 tpr_5
Pfam PF01425 Amidase
ProSitePatterns PS00571 Amidases signature.
Gene3D G3DSA:3.90.1300.10 Amidase signature (AS) enzymes
PANTHER PTHR46310:SF5 OUTER ENVELOPE PROTEIN 64, CHLOROPLASTIC
PANTHER PTHR46310 AMIDASE 1
SUPERFAMILY SSF48452 TPR-like
Pfam PF13414 TPR repeat
ProSiteProfiles PS50293 TPR repeat region circular profile.
MapolyID Mapoly0084s0045 -

Nomenclature

Gene symbol Product Transcript ID Status
MpAMI1 transcription factor, Auxin related protein, Hormone related protein Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp5g17980.1 chr5:19015619..19021165 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp5g17980.2 chr5:19015619..19020448 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.