Mp5g22790



Description

Annotation

Database ID Description
KEGG K03125 transcription initiation factor TFIID subunit 1 [EC:2.3.1.48 2.7.11.1]
KOG KOG0008 Transcription initiation factor TFIID, subunit TAF1; C-term missing; [K]
KOG KOG0008 Transcription initiation factor TFIID, subunit TAF1; N-term missing; [K]
Gene3D G3DSA:1.20.920.10 Histone Acetyltransferase; Chain A
MobiDBLite mobidb-lite consensus disorder prediction
SMART SM00213 ubq_7
Pfam PF15288 Zinc knuckle
PANTHER PTHR13900:SF0 TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 1
Gene3D G3DSA:3.10.20.90 -
ProSiteProfiles PS50053 Ubiquitin domain profile.
Coils Coil Coil
SUPERFAMILY SSF47370 Bromodomain
Pfam PF00240 Ubiquitin family
ProSiteProfiles PS50014 Bromodomain profile.
Pfam PF12157 Protein of unknown function (DUF3591)
ProSitePatterns PS00633 Bromodomain signature.
SUPERFAMILY SSF54236 Ubiquitin-like
PRINTS PR00503 Bromodomain signature
CDD cd17064 Ubl_TAFs_like
Pfam PF00439 Bromodomain
PANTHER PTHR13900 TRANSCRIPTION INITIATION FACTOR TFIID
SUPERFAMILY SSF47055 TAF(II)230 TBP-binding fragment
SMART SM00297 bromo_6
Pfam PF09247 TATA box-binding protein binding
MapolyID Mapoly0010s0177 -

Nomenclature

Gene symbol Product Transcript ID Status
MpHAT5 Chromatin related protein Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp5g22790.1 chr5:24553420..24572367 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.