Mp5g23300



Description

Annotation

Database ID Description
KEGG K23504 protein SERAC1
KOG KOG4658 Apoptotic ATPase; [T]
KOG KOG2029 Uncharacterized conserved protein; N-term missing; [S]
KOG KOG0532 Leucine-rich repeat (LRR) protein, contains calponin homology domain; C-term missing; [Z]
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor
PANTHER PTHR11017:SF386 DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS)-RELATED
PANTHER PTHR11017 LEUCINE-RICH REPEAT-CONTAINING PROTEIN
Gene3D G3DSA:3.40.50.300 -
CDD cd00009 AAA
Pfam PF00931 NB-ARC domain
Coils Coil Coil
Gene3D G3DSA:3.40.50.1820 -
PRINTS PR00364 Disease resistance protein signature
SUPERFAMILY SSF53474 alpha/beta-Hydrolases
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
SMART SM00369 LRR_typ_2
SUPERFAMILY SSF52058 L domain-like
Gene3D G3DSA:1.10.8.430 -
MapolyID Mapoly0010s0128 -

Nomenclature

Gene symbol Product Transcript ID Status
MpNBS-LRR18 NBS genes Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp5g23300.1 chr5:25076043..25084117 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp5g23300.2 chr5:25077467..25084117 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.