Mp5g23860



Description

Annotation

Database ID Description
KEGG K11975 E3 ubiquitin-protein ligase RNF144 [EC:2.3.2.31]
KOG KOG1812 Predicted E3 ubiquitin ligase; [O]
KOG KOG1677 CCCH-type Zn-finger protein; N-term missing; C-term missing; [R]
SUPERFAMILY SSF90229 CCCH zinc finger
Gene3D G3DSA:1.20.120.1750 -
SMART SM00356 c3hfinal6
ProSiteProfiles PS51873 TRIAD supradomain profile.
Pfam PF01485 IBR domain, a half RING-finger domain
SMART SM00184 ring_2
ProSiteProfiles PS50089 Zinc finger RING-type profile.
SUPERFAMILY SSF57850 RING/U-box
SMART SM00647 ibrneu5
PANTHER PTHR11685 RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING
SUPERFAMILY SSF53098 Ribonuclease H-like
Gene3D G3DSA:3.30.420.10 -
ProSitePatterns PS00518 Zinc finger RING-type signature.
Pfam PF00097 Zinc finger, C3HC4 type (RING finger)
Gene3D G3DSA:4.10.1000.10 CCCH zinc finger
PANTHER PTHR11685:SF223 RBR-TYPE E3 UBIQUITIN TRANSFERASE
Pfam PF13456 Reverse transcriptase-like
Pfam PF00642 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
Gene3D G3DSA:3.30.40.10 Zinc/RING finger domain
ProSiteProfiles PS50103 Zinc finger C3H1-type profile.
Coils Coil Coil
MapolyID Mapoly0010s0070 -

Nomenclature

Gene symbol Product Transcript ID Status
MpC3H21 transcription factor, C3H Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp5g23860.1 chr5:25649174..25654452 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.