Mp6g00230



Description

Annotation

Database ID Description
KOG KOG0260 RNA polymerase II, large subunit; C-term missing; [K]
Pfam PF00623 RNA polymerase Rpb1, domain 2
Pfam PF05000 RNA polymerase Rpb1, domain 4
PANTHER PTHR19376 DNA-DIRECTED RNA POLYMERASE
CDD cd02737 RNAP_IV_NRPD1_C
Pfam PF04997 RNA polymerase Rpb1, domain 1
SUPERFAMILY SSF64484 beta and beta-prime subunits of DNA dependent RNA-polymerase
Gene3D G3DSA:1.10.132.30 -
Gene3D G3DSA:2.40.40.20 -
Gene3D G3DSA:1.10.274.100 -
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF04983 RNA polymerase Rpb1, domain 3
Gene3D G3DSA:1.10.150.390 -
SMART SM00663 rpolaneu7
PANTHER PTHR19376:SF36 DNA-DIRECTED RNA POLYMERASE IV SUBUNIT 1
Gene3D G3DSA:1.20.120.1280 -
Pfam PF04998 RNA polymerase Rpb1, domain 5
Gene3D G3DSA:3.30.1490.180 RNA polymerase ii
MapolyID Mapoly0104s0044 -

Nomenclature

Gene symbol Product Transcript ID Status
MpNRPE1b Chromatin related protein Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp6g00230.1 chr6:419761..431832 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp6g00230.2 chr6:419761..431832 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.