Mp6g18490



Description

Annotation

Database ID Description
KEGG K15192 TATA-binding protein-associated factor [EC:5.6.2.-]
KOG KOG0392 SNF2 family DNA-dependent ATPase domain-containing protein; [K]
Gene3D G3DSA:3.40.50.300 -
MobiDBLite mobidb-lite consensus disorder prediction
ProSiteProfiles PS51194 Superfamilies 1 and 2 helicase C-terminal domain profile.
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
Pfam PF02985 HEAT repeat
SMART SM00490 helicmild6
Pfam PF00271 Helicase conserved C-terminal domain
Pfam PF00176 SNF2 family N-terminal domain
CDD cd18793 SF2_C_SNF
ProSiteProfiles PS51192 Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile.
SMART SM00487 ultradead3
Gene3D G3DSA:3.40.50.10810 -
PANTHER PTHR36498 TATA-BINDING PROTEIN-ASSOCIATED FACTOR 172
Pfam PF12054 Domain of unknown function (DUF3535)
ProSiteProfiles PS50077 HEAT repeat profile.
Gene3D G3DSA:1.25.10.10 -
Coils Coil Coil
CDD cd17999 DEXHc_Mot1
SUPERFAMILY SSF48371 ARM repeat
MapolyID Mapoly0038s0059 -

Nomenclature

Gene symbol Product Transcript ID Status
Mpsnf1.19 Chromatin related protein Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp6g18490.1 chr6:20831522..20848609 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp6g18490.2 chr6:20831522..20848594 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.