Mp6g19270



Description

Annotation

Database ID Description
KOG KOG4234 TPR repeat-containing protein; N-term missing; C-term missing; [R]
KOG KOG2084 Predicted histone tail methylase containing SET domain; N-term missing; [B]
CDD cd20071 SET_SMYD
SUPERFAMILY SSF48452 TPR-like
ProSiteProfiles PS50005 TPR repeat profile.
Pfam PF00515 Tetratricopeptide repeat
PANTHER PTHR47643 TPR DOMAIN PROTEIN (AFU_ORTHOLOGUE AFUA_5G12710)
Pfam PF00856 SET domain
Gene3D G3DSA:1.25.40.10 -
Gene3D G3DSA:2.170.270.10 SET domain
ProSiteProfiles PS50293 TPR repeat region circular profile.
ProSiteProfiles PS50280 SET domain profile.
SUPERFAMILY SSF82199 SET domain
SMART SM00028 tpr_5
MapolyID Mapoly0045s0136 -

Nomenclature

Gene symbol Product Transcript ID Status
MpATXR8 Chromatin related protein Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp6g19270.1 chr6:21579976..21583468 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp6g19270.2 chr6:21580019..21583468 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.