Mp7g11900



Description

Annotation

Database ID Description
KEGG K15083 DNA repair protein RAD16
KOG KOG1002 Nucleotide excision repair protein RAD16; [L]
ProSitePatterns PS00518 Zinc finger RING-type signature.
CDD cd18793 SF2_C_SNF
SMART SM00487 ultradead3
SMART SM00490 helicmild6
MobiDBLite mobidb-lite consensus disorder prediction
Gene3D G3DSA:3.30.40.10 Zinc/RING finger domain
Pfam PF00271 Helicase conserved C-terminal domain
PANTHER PTHR45626 TRANSCRIPTION TERMINATION FACTOR 2-RELATED
ProSiteProfiles PS50089 Zinc finger RING-type profile.
CDD cd18008 DEXDc_SHPRH-like
Gene3D G3DSA:3.40.50.10810 -
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
Pfam PF00176 SNF2 family N-terminal domain
Pfam PF00097 Zinc finger, C3HC4 type (RING finger)
ProSiteProfiles PS51194 Superfamilies 1 and 2 helicase C-terminal domain profile.
SUPERFAMILY SSF57850 RING/U-box
PANTHER PTHR45626:SF33 -
SMART SM00184 ring_2
ProSiteProfiles PS51192 Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile.
MapolyID Mapoly0003s0201 -

Nomenclature

Gene symbol Product Transcript ID Status
Mpsnf1.20 Chromatin related protein Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp7g11900.1 chr7:13234069..13241627 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.