Mp7g15670



Description

Annotation

Database ID Description
KEGG K11681 helicase SWR1 [EC:5.6.2.-]
KOG KOG0391 SNF2 family DNA-dependent ATPase; C-term missing; [R]
KOG KOG4462 WASP-interacting protein VRP1/WIP, contains WH2 domain; N-term missing; [Z]
KOG KOG0391 SNF2 family DNA-dependent ATPase; C-term missing; [R]
Pfam PF00176 SNF2 family N-terminal domain
MobiDBLite mobidb-lite consensus disorder prediction
Coils Coil Coil
PANTHER PTHR45685 HELICASE SRCAP-RELATED
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
ProSiteProfiles PS51192 Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile.
Pfam PF00271 Helicase conserved C-terminal domain
ProSiteProfiles PS50090 Myb-like domain profile.
ProSiteProfiles PS51204 HSA domain profile.
PANTHER PTHR45685:SF1 HELICASE SRCAP
Gene3D G3DSA:3.40.50.300 -
SMART SM00573 bromneu2
SMART SM00490 helicmild6
SMART SM00717 sant
SMART SM00487 ultradead3
Pfam PF07529 HSA
CDD cd18003 DEXQc_SRCAP
CDD cd00167 SANT
Pfam PF13921 Myb-like DNA-binding domain
Gene3D G3DSA:3.40.50.10810 -
ProSiteProfiles PS51194 Superfamilies 1 and 2 helicase C-terminal domain profile.
Gene3D G3DSA:1.10.10.60 -
SUPERFAMILY SSF46689 Homeodomain-like
CDD cd18793 SF2_C_SNF
MapolyID Mapoly0111s0052 -

Nomenclature

Gene symbol Product Transcript ID Status
Mpsnf1.21 Chromatin related protein Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp7g15670.1 chr7:17322996..17340192 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp7g15670.2 chr7:17322996..17340188 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.