Mp7g16780



Description

Annotation

Database ID Description
KOG KOG1080 Histone H3 (Lys4) methyltransferase complex, subunit SET1 and related methyltransferases; N-term missing; [BK]
KOG KOG1904 Transcription coactivator; C-term missing; [K]
KOG KOG1015 Transcription regulator XNP/ATRX, DEAD-box superfamily; C-term missing; [K]
Gene3D G3DSA:2.30.30.140 -
CDD cd15662 ePHD_ATX1_2_like
ProSiteProfiles PS51805 Extended PHD (ePHD) domain profile.
ProSitePatterns PS01359 Zinc finger PHD-type signature.
SMART SM00317 set_7
MobiDBLite mobidb-lite consensus disorder prediction
ProSiteProfiles PS51542 FYR domain FYRN motif profile.
CDD cd10518 SET_SETD1-like
Pfam PF13832 PHD-zinc-finger like domain
SUPERFAMILY SSF63748 Tudor/PWWP/MBT
Pfam PF00856 SET domain
SUPERFAMILY SSF82199 SET domain
Pfam PF05964 F/Y-rich N-terminus
Gene3D G3DSA:2.170.270.10 SET domain
Gene3D G3DSA:3.30.40.10 Zinc/RING finger domain
CDD cd15494 PHD_ATX1_2_like
Gene3D G3DSA:3.30.160.360 -
ProSiteProfiles PS50016 Zinc finger PHD-type profile.
Pfam PF00855 PWWP domain
PANTHER PTHR13793 PHD FINGER PROTEINS
SMART SM00293 PWWP_4
ProSiteProfiles PS51543 FYR domain FYRC motif profile.
ProSiteProfiles PS50280 SET domain profile.
PANTHER PTHR13793:SF147 HISTONE-LYSINE N-METHYLTRANSFERASE ATX2
ProSiteProfiles PS50812 PWWP domain profile.
Pfam PF13831 PHD-finger
Pfam PF05965 F/Y rich C-terminus
SUPERFAMILY SSF57903 FYVE/PHD zinc finger
SMART SM00541 fyrn_3
SMART SM00542 fyrc_3
SMART SM00249 PHD_3
ProSiteProfiles PS50868 Post-SET domain profile.
MapolyID Mapoly0051s0016 -

Nomenclature

Gene symbol Product Transcript ID Status
MpATX1 Chromatin related protein Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp7g16780.1 chr7:18656449..18673364 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp7g16780.2 chr7:18656449..18673364 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.