Mp8g01420



Description

Annotation

Database ID Description
KOG KOG1244 Predicted transcription factor Requiem/NEURO-D4; N-term missing; [K]
KOG KOG4299 PHD Zn-finger protein; N-term missing; C-term missing; [R]
MobiDBLite mobidb-lite consensus disorder prediction
SUPERFAMILY SSF54171 DNA-binding domain
Gene3D G3DSA:3.30.40.10 Zinc/RING finger domain
Pfam PF00628 PHD-finger
ProSitePatterns PS01359 Zinc finger PHD-type signature.
CDD cd15489 PHD_SF
SUPERFAMILY SSF47370 Bromodomain
ProSiteProfiles PS51542 FYR domain FYRN motif profile.
Gene3D G3DSA:3.30.890.10 -
SUPERFAMILY SSF57903 FYVE/PHD zinc finger
ProSiteProfiles PS51543 FYR domain FYRC motif profile.
Gene3D G3DSA:1.20.920.10 Histone Acetyltransferase; Chain A
SMART SM00249 PHD_3
CDD cd15519 PHD1_Lid2p_like
ProSiteProfiles PS50016 Zinc finger PHD-type profile.
Pfam PF01429 Methyl-CpG binding domain
Pfam PF15613 Williams-Beuren syndrome DDT (WSD), D-TOX E motif
PANTHER PTHR47162 OS02G0192300 PROTEIN
Pfam PF15612 WSTF, HB1, Itc1p, MBD9 motif 1
CDD cd04369 Bromodomain
ProSiteProfiles PS50982 Methyl-CpG-binding domain (MBD) profile.
SMART SM00297 bromo_6
MapolyID Mapoly0064s0056 -

Nomenclature

Gene symbol Product Transcript ID Status
MpBromo12 Chromatin related protein Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp8g01420.1 chr8:1520556..1535685 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.