Mp8g04570



Description

Annotation

Database ID Description
KOG KOG0106 Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily); [A]
ProSiteProfiles PS50102 Eukaryotic RNA Recognition Motif (RRM) profile.
PANTHER PTHR23147:SF146 SERINE/ARGININE-RICH SPLICING FACTOR RS31-RELATED
MobiDBLite mobidb-lite consensus disorder prediction
SUPERFAMILY SSF54928 RNA-binding domain, RBD
Gene3D G3DSA:3.30.70.330 -
PANTHER PTHR23147 SERINE/ARGININE RICH SPLICING FACTOR
CDD cd12234 RRM1_AtRSp31_like
Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
SMART SM00360 rrm1_1
MapolyID Mapoly0186s0008 -

Nomenclature

Gene symbol Product Transcript ID Status
MpSR6 SR proteins, RNA-splicing Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp8g04570.1 chr8:5107261..5112735 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.