Mp8g05230



Description

Annotation

Database ID Description
KOG KOG1001 Helicase-like transcription factor HLTF/DNA helicase RAD5, DEAD-box superfamily; [KL]
Gene3D G3DSA:3.40.50.10810 -
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
Pfam PF00176 SNF2 family N-terminal domain
Pfam PF00271 Helicase conserved C-terminal domain
MobiDBLite mobidb-lite consensus disorder prediction
ProSiteProfiles PS51194 Superfamilies 1 and 2 helicase C-terminal domain profile.
CDD cd18793 SF2_C_SNF
PANTHER PTHR45626 TRANSCRIPTION TERMINATION FACTOR 2-RELATED
Gene3D G3DSA:1.20.120.850 -
CDD cd18008 DEXDc_SHPRH-like
Gene3D G3DSA:3.40.50.300 -
ProSitePatterns PS00518 Zinc finger RING-type signature.
ProSiteProfiles PS50089 Zinc finger RING-type profile.
SUPERFAMILY SSF57850 RING/U-box
SMART SM00490 helicmild6
ProSiteProfiles PS51192 Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile.
SMART SM00487 ultradead3
Gene3D G3DSA:3.30.40.10 Zinc/RING finger domain
PANTHER PTHR45626:SF24 HELICASE-LIKE TRANSCRIPTION FACTOR CHR28
MapolyID Mapoly0081s0024 -

Nomenclature

Gene symbol Product Transcript ID Status
Mpsnf1.22 Chromatin related protein Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp8g05230.1 chr8:5944988..5961446 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.