Mp8g15710



Description

Annotation

Database ID Description
KEGG K24273 U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein
KOG KOG2202 U2 snRNP splicing factor, small subunit, and related proteins; [A]
KOG KOG4364 Chromatin assembly factor-I; N-term missing; C-term missing; [B]
KOG KOG0670 U4/U6-associated splicing factor PRP4; C-term missing; [A]
KOG KOG4715 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin; N-term missing; [B]
MobiDBLite mobidb-lite consensus disorder prediction
PANTHER PTHR12620:SF4 ZINC FINGER CCCH-TYPE, RNA BINDING MOTIF AND SERINE/ARGININE RICH 2
ProSiteProfiles PS50103 Zinc finger C3H1-type profile.
PANTHER PTHR12620 U2 SNRNP AUXILIARY FACTOR, SMALL SUBUNIT
CDD cd12540 RRM_U2AFBPL
SUPERFAMILY SSF54928 RNA-binding domain, RBD
Coils Coil Coil
Gene3D G3DSA:3.30.70.330 -
PRINTS PR01848 U2 auxiliary factor small subunit signature
ProSiteProfiles PS50102 Eukaryotic RNA Recognition Motif (RRM) profile.
SMART SM00361 rrm2_1
Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
SMART SM00360 rrm1_1
SMART SM00356 c3hfinal6
MapolyID Mapoly0079s0042 -

Nomenclature

Gene symbol Product Transcript ID Status
MpC3H33 transcription factor, C3H Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp8g15710.1 chr8:17699654..17704550 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.