Mp8g18560



Description

Annotation

Database ID Description
KOG KOG4442 Clathrin coat binding protein/Huntingtin interacting protein HIP1, involved in regulation of endocytosis; C-term missing; [U]
KOG KOG1984 Vesicle coat complex COPII, subunit SFB3; C-term missing; [U]
KOG KOG1467 Translation initiation factor 2B, delta subunit (eIF-2Bdelta/GCD2); C-term missing; [J]
MobiDBLite mobidb-lite consensus disorder prediction
ProSiteProfiles PS51215 AWS domain profile.
PANTHER PTHR22884 SET DOMAIN PROTEINS
Pfam PF00856 SET domain
Gene3D G3DSA:3.30.40.100 -
SUPERFAMILY SSF82199 SET domain
ProSiteProfiles PS51050 Zinc finger CW-type profile.
CDD cd19172 SET_SETD2
PANTHER PTHR22884:SF413 HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-36 SPECIFIC
ProSiteProfiles PS50280 SET domain profile.
Gene3D G3DSA:2.170.270.10 SET domain
ProSiteProfiles PS50868 Post-SET domain profile.
Pfam PF17907 AWS domain
Pfam PF07496 CW-type Zinc Finger
SMART SM00317 set_7
SMART SM00570 shorttest3
MapolyID Mapoly0192s0005 -

Nomenclature

Gene symbol Product Transcript ID Status
MpASHH3 Chromatin related protein Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp8g18560.1 chr8:20654064..20671763 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp8g18560.2 chr8:20654058..20671763 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.