Mapoly0043s0128



Description

SWI/SNF-RELATED CHROMATIN BINDING PROTEIN

Annotation

Database ID Description
KOG KOG0381 HMG box-containing protein
GO GO:0003677 DNA binding
PFAM PF00505 HMG (high mobility group) box
PFAM PF01388 ARID/BRIGHT DNA binding domain
PANTHER PTHR13711 SWI/SNF-RELATED CHROMATIN BINDING PROTEIN
GO GO:0005622 intracellular
PANTHER PTHR13711:SF145

Nomenclature

Gene symbol Product Transcript ID Status
MpARID-HMGBOX transcription factor, ARID-HMGbox Published

Transcript models

Transcript ID Location Sequences Extract region
Mapoly0043s0128.1 scaffold_43:1235158..1240409 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mapoly0043s0128.2 scaffold_43:1233261..1240577 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mapoly0043s0128.3 scaffold_43:1233261..1240561 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mapoly0043s0128.4 scaffold_43:1235158..1240577 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.