Mp5g06580



Description

Annotation

Database ID Description
ProSiteProfiles PS51204 HSA domain profile.
MobiDBLite mobidb-lite consensus disorder prediction
Coils Coil Coil
Pfam PF00271 Helicase conserved C-terminal domain
FunFam G3DSA:3.40.50.10810:FF:000016 Chromatin structure-remodeling complex protein SYD
SMART SM00487 ultradead3
ProSiteProfiles PS51192 Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile.
Gene3D G3DSA:3.40.50.300 -
SMART SM01314 SnAC_2
FunFam G3DSA:3.40.50.300:FF:000871 Chromatin structure-remodeling complex protein SYD
Pfam PF00176 SNF2-related domain
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
CDD cd18793 SF2_C_SNF
Gene3D G3DSA:3.40.50.10810 -
Pfam PF14619 Snf2-ATP coupling, chromatin remodelling complex
SMART SM00490 helicmild6
ProSiteProfiles PS51194 Superfamilies 1 and 2 helicase C-terminal domain profile.
PANTHER PTHR10799 SNF2/RAD54 HELICASE FAMILY
CDD cd17996 DEXHc_SMARCA2_SMARCA4
KOG KOG0386 Chromatin remodeling complex SWI/SNF, component SWI2 and related ATPases (DNA/RNA helicase superfamily); [BK]
KOG KOG4369 RTK signaling protein MASK/UNC-44; N-term missing; C-term missing; [T]
KOG KOG4701 Chitinase; N-term missing; [M]
KOG KOG3685 Uncharacterized conserved protein; C-term missing; [S]
KOG KOG3685 Uncharacterized conserved protein; N-term missing; C-term missing; [S]
MapolyID Mapoly0171s0025 -

Nomenclature

Gene symbol Product Transcript ID Status
Mpsnf1.16 Chromatin related protein Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp5g06580.1 chr5:8736305..8772965 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp5g06580.2 chr5:8736305..8772965 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.