Mp1g04480



Description

Annotation

Database ID Description
KOG KOG0484 Transcription factor PHOX2/ARIX, contains HOX domain; C-term missing; [K]
SMART SM00389 HOX_1
PANTHER PTHR36968 HOMEOBOX-DDT DOMAIN PROTEIN RLT2
MobiDBLite mobidb-lite consensus disorder prediction
SUPERFAMILY SSF46689 Homeodomain-like
Coils Coil Coil
CDD cd00086 homeodomain
ProSiteProfiles PS50827 DDT domain profile.
Pfam PF00046 Homeodomain
Pfam PF15613 Williams-Beuren syndrome DDT (WSD), D-TOX E motif
SMART SM00571 testlast3
Pfam PF15612 WSTF, HB1, Itc1p, MBD9 motif 1
Pfam PF02791 DDT domain
PANTHER PTHR36968:SF5 HOMEOBOX-DDT DOMAIN PROTEIN RLT2
Pfam PF05066 HB1, ASXL, restriction endonuclease HTH domain
ProSiteProfiles PS50071 'Homeobox' domain profile.
Gene3D G3DSA:1.10.10.60 -
GO GO:0006351 transcription, DNA-templated
GO GO:0003677 DNA binding
GO GO:0006355 regulation of transcription, DNA-templated
MapolyID Mapoly0005s0159 -

Nomenclature

Gene symbol Product Transcript ID Status
MpDDT1 transcription factor, HD, homeodomain protein Published
MpHD1 transcription factor, HD, homeodomain protein Published

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v7.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g04480.1 chr1:4778639..4791420 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.