Mp1g06080



Description

Annotation

Database ID Description
KEGG K15397 KCS; 3-ketoacyl-CoA synthase [EC:2.3.1.199]
PIRSF PIRSF036417 Very_long_ch_3-ktacl-CoA_syn
CDD cd00831 CHS_like
Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
Gene3D G3DSA:3.40.47.10 -
PANTHER PTHR31561:SF99 3-KETOACYL-COA SYNTHASE 4
SUPERFAMILY SSF53901 Thiolase-like
Pfam PF08392 FAE1/Type III polyketide synthase-like protein
PANTHER PTHR31561 3-KETOACYL-COA SYNTHASE
GO GO:0006633 fatty acid biosynthetic process
GO GO:0016020 membrane
GO GO:0016746 transferase activity, transferring acyl groups
GO GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups
MapolyID Mapoly0005s0001 -

Nomenclature

Gene symbol Product Transcript ID Status
MpFAE1 β-ketoacyl-CoA synthase; fatty acid elongase Published
MpKCS1 Secondary metabolism enzyme, Cuticle related protein Provisional

Associated Literature (AI-based literature mining, Beta-version)

β-ketoacyl-CoA synthase; fatty acid elongase; substrate/product unknown (from nomenclature)

0 core 1 peripheral

Kajikawa M, Yamato KT, Kanamaru H, Sakuradani E, Shimizu S, Fukuzawa H, Sakai Y, Ohyama K. (2003) · Biosci Biotechnol Biochem  research experimental comparator
A third Marchantia beta-ketoacyl-CoA synthase (KCS) gene (GenBank AY308831, Yamaoka et al.), compared with MpFAE3 at the amino-acid level. Its overexpression in M. polymorpha did not alter fatty-acid composition or morphology, unlike MpFAE2/MpFAE3. NOTE: the curated table listed MpFAE1 under PMID12723610, but MpFAE1 is actually named in THIS paper (12951498); 12723610 contains no MpFAE1 (its 'FAE1' refers to Arabidopsis FAE1).

Transcript models

Transcript ID Location Sequences Extract region
Mp1g06080.1 chr1:6368124..6371837 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g06080.2 chr1:6369240..6371837 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v7.1 genome.

Link to the original image in MBEX


Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

MarpolBase / Genome Informatics Lab. NIG.