Mp1g09420



Description

Annotation

Database ID Description
KEGG K09422 MYBP; transcription factor MYB, plant
KOG KOG0048 Transcription factor, Myb superfamily; [K]
Gene3D G3DSA:1.10.10.60 -
SUPERFAMILY SSF46689 Homeodomain-like
ProSiteProfiles PS51294 Myb-type HTH DNA-binding domain profile.
CDD cd00167 SANT
PANTHER PTHR10641 MYB FAMILY TRANSCRIPTION FACTOR
Pfam PF00249 Myb-like DNA-binding domain
SMART SM00717 sant
PANTHER PTHR10641:SF586 TRANSCRIPTION FACTOR MYB106
MapolyID Mapoly0096s0058 -

Nomenclature

Gene symbol Product Transcript ID Status
MpR2R3-MYB17 transcription factor, MYB Published
MpSBG9 transcription factor, MYB Provisional

Associated Literature (AI-based literature mining, Beta-version)

Subgroup-9 MIXTA-type R2R3-MYB (=MpMIXTA/MpR2R3-MYB17; Mp1g09420); regulates cuticle biosynthesis. Mpsbg9 mutants alter cuticle-related gene expression; MIXTA-MYB lineage implicated in early cuticle evolution and land colonization.

2 core 1 peripheral

Xu, B., et al. (2021) · New Phytologist  research experimental subject
Subgroup-9 MIXTA-type R2R3-MYB (=MpMIXTA/MpR2R3-MYB17; Mp1g09420); regulates cuticle biosynthesis. Mpsbg9 mutants alter cuticle-related gene expression; MIXTA-MYB lineage implicated in early cuticle evolution and land colonization.
Tanaka, H., et al. (2018) · Plant Biotchnology  research experimental subject
Salinity-upregulated R2R3-MYB transcription factor (homolog of Arabidopsis ATMIXTA/MYB16), identified by RNA-Seq (logFC 1.12, FDR 0.0115). qRT-PCR confirmed the RNA-Seq expression pattern.
Althoff, F., et al. (2022) · Fronteirs in Plant Science  research citation comparator
MYB TF regulating cutin formation

Transcript models

Transcript ID Location Sequences Extract region
Mp1g09420.1 chr1:9738299..9741561 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g09420.2 chr1:9738299..9741561 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v7.1 genome.

Link to the original image in MBEX


Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.