Mp1g11660



Description

Annotation

Database ID Description
KOG KOG0492 Transcription factor MSH, contains HOX domain; [R]
Pfam PF00046 Homeodomain
ProSiteProfiles PS50071 'Homeobox' domain profile.
PANTHER PTHR46777:SF5 WUSCHEL-RELATED HOMEOBOX 13
SUPERFAMILY SSF46689 Homeodomain-like
Gene3D G3DSA:1.10.10.60 -
MobiDBLite mobidb-lite consensus disorder prediction
PANTHER PTHR46777 WUSCHEL-RELATED HOMEOBOX 13
CDD cd00086 homeodomain
SMART SM00389 HOX_1
GO GO:0003700 DNA-binding transcription factor activity
GO GO:0003677 DNA binding
MapolyID Mapoly0014s0060 -

Nomenclature

Gene symbol Product Transcript ID Status
MpHD6 transcription factor, HD, homeodomain protein Published
MpWOX transcription factor, HD, homeodomain protein Published

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v7.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g11660.1 chr1:11923403..11930642 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g11660.2 chr1:11923486..11930642 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.