Mp1g11830



Description

Annotation

Database ID Description
PANTHER PTHR46373 PROTEIN RKD4
MobiDBLite mobidb-lite consensus disorder prediction
PANTHER PTHR46373:SF9 OS01G0246500 PROTEIN
ProSiteProfiles PS51519 RWP-RK domain profile.
Pfam PF02042 RWP-RK domain
GO GO:0003700 DNA-binding transcription factor activity
MapolyID Mapoly0014s0044 -

Nomenclature

Gene symbol Product Transcript ID Status
MpMID RWP-RK domain containing protein of the MID clade Published
MpRWP2 RWP-RK domain containing protein of the MID clade Published
Also known as MpRWP2
Also known as MpMID

Associated Literature (AI-based literature mining, Beta-version)

RWP-RK transcription factor co-expressed with MpDUO1, but its loss does not affect MpDUO1 expression and male Mpmid knockout mutants remain fertile, indicating a non-essential role contrasting with its central role in Volvox.

1 core 2 peripheral

Higo, A., et al. (2018) · Nature Communications  research experimental subject
RWP-RK transcription factor co-expressed with MpDUO1, but its loss does not affect MpDUO1 expression and male Mpmid knockout mutants remain fertile, indicating a non-essential role contrasting with its central role in Volvox.
Rövekamp, M., et al. (2016) · Current Biology  research sequence comparator
RWP-RK family member (Mapoly0014s0044); phylogenetic comparison.
Wang, M., et al. (2024a) · Communications Biology  research sequence background
Listed only in the data availability/accession section (Mp1g11830); no functional analysis.

Transcript models

Transcript ID Location Sequences Extract region
Mp1g11830.1 chr1:12031434..12035011 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g11830.2 chr1:12031434..12035011 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v7.1 genome.

Link to the original image in MBEX


Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.