Mp1g17220



Description

Annotation

Database ID Description
KEGG K08506 SYP7; syntaxin of plants SYP7
KOG KOG3065 SNAP-25 (synaptosome-associated protein) component of SNARE complex; N-term missing; [U]
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF05739 SNARE domain
PANTHER PTHR19957:SF264 SYNTAXIN-73
PANTHER PTHR19957 SYNTAXIN
CDD cd15841 SNARE_Qc
ProSiteProfiles PS50192 t-SNARE coiled-coil homology domain profile.
SUPERFAMILY SSF58038 SNARE fusion complex
Coils Coil Coil
SMART SM00397 tSNARE_6
Gene3D G3DSA:1.20.5.110 -
MapolyID Mapoly0001s0062 -

Nomenclature

Gene symbol Product Transcript ID Status
MpSYP7B.1 Ortholog of Arabidopsis SYP7 genes Published
MpSYP7B.2 Ortholog of Arabidopsis SYP7 genes Published

Transcript models

Transcript ID Location Sequences Extract region
Mp1g17220.1 chr1:17550705..17557404 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g17220.2 chr1:17550705..17557404 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.