| Database | ID | Description |
|---|---|---|
| KOG | KOG1677 | CCCH-type Zn-finger protein; N-term missing; C-term missing; [R] |
| SUPERFAMILY | SSF90229 | CCCH zinc finger |
| ProSiteProfiles | PS50084 | Type-1 KH domain profile. |
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| Gene3D | G3DSA:4.10.1000.10 | CCCH zinc finger |
| ProSiteProfiles | PS50103 | Zinc finger C3H1-type profile. |
| Pfam | PF00013 | KH domain |
| SUPERFAMILY | SSF54791 | Eukaryotic type KH-domain (KH-domain type I) |
| Pfam | PF14608 | RNA-binding, Nab2-type zinc finger |
| Pfam | PF00642 | Zinc finger C-x8-C-x5-C-x3-H type (and similar) |
| CDD | cd00105 | KH-I |
| PANTHER | PTHR12547:SF124 | ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 52 |
| SMART | SM00356 | c3hfinal6 |
| PANTHER | PTHR12547 | CCCH ZINC FINGER/TIS11-RELATED |
| Gene3D | G3DSA:3.30.1370.10 | - |
| SMART | SM00322 | kh_6 |
| GO | GO:0003723 | RNA binding |
| GO | GO:0046872 | metal ion binding |
| GO | GO:0003676 | nucleic acid binding |
| MapolyID | Mapoly0031s0160 | - |
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpC3H8 | transcription factor, C3H | Provisional |
Caution: MBEX data are analyzed based on the v7.1 genome.
Link to the original image in MBEX
Sequences: |
Gene UTR + CDS + intron |
| >Mp2g05060.1 tctcacggct ccccctctct ctccctcttt ctctcatcca cttacttccg ctccgctgtc tgcgctcgcc tctgcttgcc tcgctggtgc accctgaggt cctcgaagct tgctcacatt gctcggggcc ggttgcgttc atattcgctg tgttcgcttg tcgcgattga atgcgtgggg agtcttaagc actctttcta ggactgggat cgagctgtgt agtagcagtc ttcgagctgc gtcggtgttt caagtccttt tgccctcctt cagttgtagt gacagtccgc gtctagtcgt ctgtcagtgc aggacttgct gcagctatgg atccctacgg tcctccgcgc aagagaccca gggccgattc ttctctgaat ggcaatggga acggccattc tgctgctggc agcagcgaga tggagtgtag gagattcaac actcccgagg ggtgtcctta cggagatgcg tgtcgtttca gacatgttcc cggtgcaccc acgggtccca ttgctccttc cgtagcttcg ttatctctcc tcccaggtat gtcttctctt tcgtgttttt tcttaggttc ttctgtcacg ggcgatttga cagcgcacct tgatgcttca ttcactgttt ctcctgtttt aagatcgact cgtgtggttt ctgcaccttt cataagtatg ccgtatttgt gtattctact gacggcatct tgcccacgtc gcacggccac agtctgagcc ttgttttggg tatcatcttt tttgagatct ggtctggaag agtgcacttc tctgagagta tgactgccgg gtcgttccca ttaaagtttc ggattgggct gcctagtcct gggaaccctt ctcgtggagg agagtccttt accaggcagt ctctttttgt tcacaacgcg ccacagagtt cgaacttctc gtgtcggtgt tgcacccgtg gacacgcttt catgttaatc agcctatctt gcaagtatgt tgcggatgct ctagatctat ttgatcctac ttattttgtg accgtcacca gtctgaggaa cgcgcctact tggttgtact ttgcttcttc caaacactgc tctggaactc ttctgttaaa tagctcacag ttttggctca cagatatttt ataacttgac ctcattctat gttcagacaa ctatggatat atccagaaca ctcatggtat aaataataaa atgttttgta atttacactc atcctttctg acttgtttat ttcgagccga ttttcacatc tttactatct ccatattggt cgcgtcgcag tctcgtcctg tctcttaagt cgacttgcca atctgtcgaa ctcatcagaa agcactactc tcagcacgta gaagaaaagt ctttgagcca cagctgagca tctgtcatga caactgtgtg gcgtttctta gttgaatgaa ggataacaaa cgtaggatgc agctagcgtc ctgtgtattt acaacgatta atataaacac ctccatatgg ttccatttga ttgattgatg agttacagga gtttgtgttt ctttgaccgg ctccatggtt gtatacgacc ttccagataa aagtattgaa gtccattgca aggtgtctgg aaggcaaaac ttcctagcca tctgttcagt tggatcggct cacaaattat tgtaacatta ttcccgtatc tgtttatctg aaagtagtat attggacgaa ctattttctt caatgaagaa gattgttatt caggcaacgt taacgagaca aaccggaaat gtctaagttc ctgcgcacta ttatgtggaa tgtccttttg gacttacgat tctgttcttc gtgttcttgt ctcgttacgg ttttgataag tttgtagtct aaaattcaga aaggtcgctt gggttcgtcc attgagtggc aactacaggg acgccgcact agctcctgct tagcggtgaa gcctgacgtt gtattccagc cttcgcttcc tgtaagttgt ggaactggtc tgaattggcc ttcatcgcca tacttttaag cgtattaaag attttttaca cgcttcaaga tttgtatacc tcaatactta cagctttacc tgtattgatg ttgactgaag attttattgt cgggtgtggt acgagatctg aaacaacaaa taataatggg aaacctaaag aatcaacttc cggcttccaa ctttcatatt tttgacgtga tcgggattgt tttgttgcga tggcagaaaa ggagtccagc gggggcggaa atgcgaatcg tactaaaccg tgcaccaaat tctttaggtt gagcgtgccc tattctgtgt tttcctggat ttcttttaat tgttcttgga atacgcataa ccttaaccgt cgctggtttc actgactgtg gcctttttta tctgtagcac gtctggctgt ccgtatggcg agggttgcca cttcctccat tatgtccccg gcggggttcc tctgggtatc aacactttat ccaatatgag ttccagcagt ggtatgatga gtggcagtgg cggtggagca ggaggtagtg ggggtggtgg tagtggaagc ggaggtgggg gtggtgtacg aaaagttctt ggtggtgttg gacctgctgg aatccctgct cccttgtctc cgtcagacca gggagcgaac cttggaggat tcagaactcg gctttgcaat cgatatgata caccagaagg atgtcggttt ggtgagaagt gtcactttgc tcatggcgaa aatcaactac gcaagtcgac cagctctagc aatccacccg agcgtgagtc cttagtcgag tttccccgga gtcgtggccc agcaccatca tcgtctggca gtgggtacag acagggttca ggaggcagtg gtagcggcgg aggcatgttt gtttctgaag gaaggtttgg tgggggtggg ggtgggggtg ggggcggcgg cggcggcgga ggaggaggag gaggaggagg aggtggtggt ggtggtagag acggtggtag gccttacggt ttaagggaac caacgcctcc agggttagct gcagcagcgt ctttcggggc ctcatctaca gcaaaaatta gtatagaggc ttctctagct ggagcaatca tcggcaaggg aggtgttaat gcgaagcaga tatgccgctt gacaggggct aagctctcta tcagagaaca tgagtcagat ccgactttga ggaacgttga gatggaagga tcttttgagc agattaaaca agccagcaca atggtgcgtc aggttctgat gcatcgagat aatctgcctg tcaagcccgc aggattcggc tcccacaact acaaaacaaa gatgtgcgag aattatgccc aaggtacttg cacgttcgga gagaggtgcc actttgctca cggtgccaac gagttgcggg agcattcaat gcgggcttga cagactgctg aagaattgtg attgcaggta atgggcttgc agatttgtgg atgtaattat aacatgggta actaagtaac atctggcaac atttttggtc aagctggctg caaggaattc tttgatgtac aacagaatgg agaactgaga ggtgtcgaaa aagttgggtt ttggatgaaa gcagtatgga actcacgaag tgcaacaagg aattaccttc aagaacaaga gaaggaacct caagaattgg aggttgtgat cttccatgat ggaatgatcc aaacgaaccg ttaacacggt tgttgaaagc tggaatgatc tccccttcaa attgttaact ttgcctgtga gggcacaggt gcgggtcgat agatttttgt tcagcatatc tgctgctaag tagatctgca agcaattcac cattgtaatc ggaattcatt aatttgggaa gggtatagag ctgatgagaa tatggttcgt tattgtacgg gattaaaaaa tttcgcaaac acagctagtg taacacttgt gagtaaatgg gtctgttggc tttgaactca gaaaggtctt cacgtaaaca ggagtcaact agatcatttt cttttgagat tttggttaca tctacccacg atactgagta ttgtaacaag caatcagttc tctatctgaa tcaatgcctg agtagtcatg tacaggaaag caggagctag tgccgttctt ggtgttagct ggttctatgc tgtcatgtga agtttctgga aagaacggtg tgggtgagct gtcacatatc cttcgacaat tcagatgaat cacctaattt gtctcaacac ttccagcttc agtaatgaaa tgttgtaatg agaaatgagg ttactggagt cctgaatctg gtttcttagt caatatttac cttatctcgt ttatttactg gtccggtcta acgtgccttt gtaaacaagt gagaccttaa tctgtcacgc aaacgattcc atatttctcc agtaaggtac atcaattgca gccgcttcga attgatggga acttttgaag cttttgggat agaatggtgt tcagtgtcgt cttgaagttg ttctttcttt gcctcgtctg cgcatgtaga agcgtcttat tgagtgaaca ggtctgagtt ccaccagata agtgggtcaa ttgacagttg gtaactctgc caatatgtat aagcatgtaa ttacggagtg tcagtgctgg gctcagtggt ctgaacaatg tagttctggg cgtcctcgta ctcgttgggg ttcttctcct agtgaccatc gccgtccttg acgaattgtt aatgagcgtt cagtgctctg aacaaagtgg tttggcatac tcaatacttg tcggggtcct tcccctcgtg accgtggtag tcctagacgg agcgtgagcg aggggtctgt gtcctgaaca ccgttggttc taggtctcct cgtactcctc aggtcttttc ccctggccgt ggtggtccta gacggattgt tagtgagggt tgagtgaact aaacaccttt ttctgggggt cctcttactc gtcggctgct tccttgtggt cgtcgttgtc ttagatagaa gtgttaatga ggggtcggtg ctctgaacac cgtttgtcct gggcgtcctc gtattcgtcg ggtcgttacc ctcgtggtac tgaaggggat gttagtgaga gttcagtact ttgaacacct tcgttcttgg cgtcttcgta ctggttgggg tccctccctc gttgcggccg tggtcctaga caaagtgtta gttaggtgtc agtgttctga acaccgacct tctgggcgtc gtacttgtag ggtctcctcg tggacgccgt ggtccgccgt agacgtagtg ttagcgaagg ttcagtgttt tgaacaccgt cgttttggcc atcacgtacc cgtcggggca cttccgctct tggccgtcct ggtcctagac ggagtgttag taaagggtca gtgttctgaa caccgttttt tgggtgtcct cgtactcgtg ggacccttcc ccttgtctcc gcagtggtcc tagatggagt gccagtgaga gttcagtgct ctgaacgcct tcgatctggg tgtcttccta gccgccggga actttttcgt tgtagctgtc gtcgtacaat cgtggtacta aaatgaacat cgctcgttga gataaacagg cctatgtctt aggggtgttg gacatggagc taacagtgtg aacctgtatt tatcctcttg cttcagtgtt gatagctttt cagtttgtca tcggtcgacc tcggaatgtg tttctgtcac aaggttggat gtcgaagtat gggttgcaga gtgttaccat gacaagaggc agtcctggac aagactgagc cccgtaaatt ctacaactct gtttctgctc ccatgctttc caacttctta caaacatcgt acaacagctt tgtttccaag ttacagatgg ttctatgcta tgtcctagtc agaagtgatt aaaaatttgt ttgttttgtt cgttgtttac taactgatct ttctattcga tagagggatg tcagctcccg atcatagcta ttgtgggttc atcgtttgtc aggattttta cttggtgagg tgggcttcaa tgtgtaaatg atgctggcat accagctttc tttctcccag tttagacatt tggggcattt tgcctgagtg gatactttct aggagagaca gaaataccca taggatgagt ggatgtttct caattcgcaa ttgtgtatat ctataaacga gaggaaagaa tcataaaccc taatggcttt catacagcca gaccagaaaa gatgttgaat actttttttt aagcgaaatc tgaattatat aataaaggct c |
mRNA UTR + CDS |
| >Mp2g05060.1 tctcacggct ccccctctct ctccctcttt ctctcatcca cttacttccg ctccgctgtc tgcgctcgcc tctgcttgcc tcgctggtgc accctgaggt cctcgaagct tgctcacatt gctcggggcc ggttgcgttc atattcgctg tgttcgcttg tcgcgattga atgcgtgggg agtcttaagc actctttcta ggactgggat cgagctgtgt agtagcagtc ttcgagctgc gtcggtgttt caagtccttt tgccctcctt cagttgtagt gacagtccgc gtctagtcgt ctgtcagtgc aggacttgct gcagctatgg atccctacgg tcctccgcgc aagagaccca gggccgattc ttctctgaat ggcaatggga acggccattc tgctgctggc agcagcgaga tggagtgtag gagattcaac actcccgagg ggtgtcctta cggagatgcg tgtcgtttca gacatgttcc cggtgcaccc acgggtccca ttgctccttc cgtagcttcg ttatctctcc tcccagaaaa ggagtccagc gggggcggaa atgcgaatcg tactaaaccg tgcaccaaat tctttagcac gtctggctgt ccgtatggcg agggttgcca cttcctccat tatgtccccg gcggggttcc tctgggtatc aacactttat ccaatatgag ttccagcagt ggtatgatga gtggcagtgg cggtggagca ggaggtagtg ggggtggtgg tagtggaagc ggaggtgggg gtggtgtacg aaaagttctt ggtggtgttg gacctgctgg aatccctgct cccttgtctc cgtcagacca gggagcgaac cttggaggat tcagaactcg gctttgcaat cgatatgata caccagaagg atgtcggttt ggtgagaagt gtcactttgc tcatggcgaa aatcaactac gcaagtcgac cagctctagc aatccacccg agcgtgagtc cttagtcgag tttccccgga gtcgtggccc agcaccatca tcgtctggca gtgggtacag acagggttca ggaggcagtg gtagcggcgg aggcatgttt gtttctgaag gaaggtttgg tgggggtggg ggtgggggtg ggggcggcgg cggcggcgga ggaggaggag gaggaggagg aggtggtggt ggtggtagag acggtggtag gccttacggt ttaagggaac caacgcctcc agggttagct gcagcagcgt ctttcggggc ctcatctaca gcaaaaatta gtatagaggc ttctctagct ggagcaatca tcggcaaggg aggtgttaat gcgaagcaga tatgccgctt gacaggggct aagctctcta tcagagaaca tgagtcagat ccgactttga ggaacgttga gatggaagga tcttttgagc agattaaaca agccagcaca atggtgcgtc aggttctgat gcatcgagat aatctgcctg tcaagcccgc aggattcggc tcccacaact acaaaacaaa gatgtgcgag aattatgccc aaggtacttg cacgttcgga gagaggtgcc actttgctca cggtgccaac gagttgcggg agcattcaat gcgggcttga cagactgctg aagaattgtg attgcaggta atgggcttgc agatttgtgg atgtaattat aacatgggta actaagtaac atctggcaac atttttggtc aagctggctg caaggaattc tttgatgtac aacagaatgg agaactgaga ggtgtcgaaa aagttgggtt ttggatgaaa gcagtatgga actcacgaag tgcaacaagg aattaccttc aagaacaaga gaaggaacct caagaattgg aggttgtgat cttccatgat ggaatgatcc aaacgaaccg ttaacacggt tgttgaaagc tggaatgatc tccccttcaa attgttaact ttgcctgtga gggcacaggt gcgggtcgat agatttttgt tcagcatatc tgctgctaag tagatctgca agcaattcac cattgtaatc ggaattcatt aatttgggaa gggtatagag ctgatgagaa tatggttcgt tattgtacgg gattaaaaaa tttcgcaaac acagctagtg taacacttgt gagtaaatgg gtctgttggc tttgaactca gaaaggtctt cacgtaaaca ggagtcaact agatcatttt cttttgagat tttggttaca tctacccacg atactgagta ttgtaacaag caatcagttc tctatctgaa tcaatgcctg agtagtcatg tacaggaaag caggagctag tgccgttctt ggtgttagct ggttctatgc tgtcatgtga agtttctgga aagaacggtg tgggtgagct gtcacatatc cttcgacaat tcagatgaat cacctaattt gtctcaacac ttccagcttc agtaatgaaa tgttgtaatg agaaatgagg ttactggagt cctgaatctg gtttcttagt caatatttac cttatctcgt ttatttactg gtccggtcta acgtgccttt gtaaacaagt gagaccttaa tctgtcacgc aaacgattcc atatttctcc agtaaggtac atcaattgca gccgcttcga attgatggga acttttgaag cttttgggat agaatggtgt tcagtgtcgt cttgaagttg ttctttcttt gcctcgtctg cgcatgtaga agcgtcttat tgagtgaaca ggtctgagtt ccaccagata agtgggtcaa ttgacagttg gtaactctgc caatatgtat aagcatgtaa ttacggagtg tcagtgctgg gctcagtggt ctgaacaatg tagttctggg cgtcctcgta ctcgttgggg ttcttctcct agtgaccatc gccgtccttg acgaattgtt aatgagcgtt cagtgctctg aacaaagtgg tttggcatac tcaatacttg tcggggtcct tcccctcgtg accgtggtag tcctagacgg agcgtgagcg aggggtctgt gtcctgaaca ccgttggttc taggtctcct cgtactcctc aggtcttttc ccctggccgt ggtggtccta gacggattgt tagtgagggt tgagtgaact aaacaccttt ttctgggggt cctcttactc gtcggctgct tccttgtggt cgtcgttgtc ttagatagaa gtgttaatga ggggtcggtg ctctgaacac cgtttgtcct gggcgtcctc gtattcgtcg ggtcgttacc ctcgtggtac tgaaggggat gttagtgaga gttcagtact ttgaacacct tcgttcttgg cgtcttcgta ctggttgggg tccctccctc gttgcggccg tggtcctaga caaagtgtta gttaggtgtc agtgttctga acaccgacct tctgggcgtc gtacttgtag ggtctcctcg tggacgccgt ggtccgccgt agacgtagtg ttagcgaagg ttcagtgttt tgaacaccgt cgttttggcc atcacgtacc cgtcggggca cttccgctct tggccgtcct ggtcctagac ggagtgttag taaagggtca gtgttctgaa caccgttttt tgggtgtcct cgtactcgtg ggacccttcc ccttgtctcc gcagtggtcc tagatggagt gccagtgaga gttcagtgct ctgaacgcct tcgatctggg tgtcttccta gccgccggga actttttcgt tgtagctgtc gtcgtacaat cgtggtacta aaatgaacat cgctcgttga gataaacagg cctatgtctt aggggtgttg gacatggagc taacagtgtg aacctgtatt tatcctcttg cttcagtgtt gatagctttt cagtttgtca tcggtcgacc tcggaatgtg tttctgtcac aaggttggat gtcgaagtat gggttgcaga gtgttaccat gacaagaggc agtcctggac aagactgagc cccgtaaatt ctacaactct gtttctgctc ccatgctttc caacttctta caaacatcgt acaacagctt tgtttccaag ttacagatgg ttctatgcta tgtcctagtc agaagtgatt aaaaatttgt ttgttttgtt cgttgtttac taactgatct ttctattcga tagagggatg tcagctcccg atcatagcta ttgtgggttc atcgtttgtc aggattttta cttggtgagg tgggcttcaa tgtgtaaatg atgctggcat accagctttc tttctcccag tttagacatt tggggcattt tgcctgagtg gatactttct aggagagaca gaaataccca taggatgagt ggatgtttct caattcgcaa ttgtgtatat ctataaacga gaggaaagaa tcataaaccc taatggcttt catacagcca gaccagaaaa gatgttgaat actttttttt aagcgaaatc tgaattatat aataaaggct c |
CDS |
| >Mp2g05060.1 atggatccct acggtcctcc gcgcaagaga cccagggccg attcttctct gaatggcaat gggaacggcc attctgctgc tggcagcagc gagatggagt gtaggagatt caacactccc gaggggtgtc cttacggaga tgcgtgtcgt ttcagacatg ttcccggtgc acccacgggt cccattgctc cttccgtagc ttcgttatct ctcctcccag aaaaggagtc cagcgggggc ggaaatgcga atcgtactaa accgtgcacc aaattcttta gcacgtctgg ctgtccgtat ggcgagggtt gccacttcct ccattatgtc cccggcgggg ttcctctggg tatcaacact ttatccaata tgagttccag cagtggtatg atgagtggca gtggcggtgg agcaggaggt agtgggggtg gtggtagtgg aagcggaggt gggggtggtg tacgaaaagt tcttggtggt gttggacctg ctggaatccc tgctcccttg tctccgtcag accagggagc gaaccttgga ggattcagaa ctcggctttg caatcgatat gatacaccag aaggatgtcg gtttggtgag aagtgtcact ttgctcatgg cgaaaatcaa ctacgcaagt cgaccagctc tagcaatcca cccgagcgtg agtccttagt cgagtttccc cggagtcgtg gcccagcacc atcatcgtct ggcagtgggt acagacaggg ttcaggaggc agtggtagcg gcggaggcat gtttgtttct gaaggaaggt ttggtggggg tgggggtggg ggtgggggcg gcggcggcgg cggaggagga ggaggaggag gaggaggtgg tggtggtggt agagacggtg gtaggcctta cggtttaagg gaaccaacgc ctccagggtt agctgcagca gcgtctttcg gggcctcatc tacagcaaaa attagtatag aggcttctct agctggagca atcatcggca agggaggtgt taatgcgaag cagatatgcc gcttgacagg ggctaagctc tctatcagag aacatgagtc agatccgact ttgaggaacg ttgagatgga aggatctttt gagcagatta aacaagccag cacaatggtg cgtcaggttc tgatgcatcg agataatctg cctgtcaagc ccgcaggatt cggctcccac aactacaaaa caaagatgtg cgagaattat gcccaaggta cttgcacgtt cggagagagg tgccactttg ctcacggtgc caacgagttg cgggagcatt caatgcgggc ttga |
Protein |
| >Mp2g05060.1 MDPYGPPRKR PRADSSLNGN GNGHSAAGSS EMECRRFNTP EGCPYGDACR FRHVPGAPTG PIAPSVASLS LLPEKESSGG GNANRTKPCT KFFSTSGCPY GEGCHFLHYV PGGVPLGINT LSNMSSSSGM MSGSGGGAGG SGGGGSGSGG GGGVRKVLGG VGPAGIPAPL SPSDQGANLG GFRTRLCNRY DTPEGCRFGE KCHFAHGENQ LRKSTSSSNP PERESLVEFP RSRGPAPSSS GSGYRQGSGG SGSGGGMFVS EGRFGGGGGG GGGGGGGGGG GGGGGGGGGG RDGGRPYGLR EPTPPGLAAA ASFGASSTAK ISIEASLAGA IIGKGGVNAK QICRLTGAKL SIREHESDPT LRNVEMEGSF EQIKQASTMV RQVLMHRDNL PVKPAGFGSH NYKTKMCENY AQGTCTFGER CHFAHGANEL REHSMRA |