Mp2g06450



Description

Annotation

Database ID Description
ProSiteProfiles PS50888 Myc-type, basic helix-loop-helix (bHLH) domain profile.
Coils Coil Coil
MobiDBLite mobidb-lite consensus disorder prediction
PANTHER PTHR46834 TRANSCRIPTION FACTOR BHLH91
SUPERFAMILY SSF47459 HLH, helix-loop-helix DNA-binding domain
SMART SM00353 finulus
Pfam PF00010 Helix-loop-helix DNA-binding domain
Gene3D G3DSA:4.10.280.10 HLH
GO GO:0046983 protein dimerization activity
MapolyID Mapoly0021s0100 -

Nomenclature

Gene symbol Product Transcript ID Status
MpBHLH8 transcription factor, bHLH Published

Associated Literature (AI-based literature mining, Beta-version)

transcription factor, bHLH (from nomenclature)

0 core 1 peripheral

Lopez-Obando, M., et al. (2022) · New Phytologist  research sequence comparator
Clade II bHLH sequence (Mp2g06450.1) retrieved by blastp and included in the cross-land-plant phylogeny; not functionally studied here.

Transcript models

Transcript ID Location Sequences Extract region
Mp2g06450.1 chr2:6630711..6634696 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v7.1 genome.

Link to the original image in MBEX


Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.