| Database | ID | Description |
|---|---|---|
| Gene3D | G3DSA:3.40.50.2300 | - |
| CDD | cd18725 | PIN_LabA-like |
| ProSiteProfiles | PS50157 | Zinc finger C2H2 type domain profile. |
| SUPERFAMILY | SSF53822 | Periplasmic binding protein-like I |
| ProSitePatterns | PS00028 | Zinc finger C2H2 type domain signature. |
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| PANTHER | PTHR35744 | - |
| PANTHER | PTHR35744:SF2 | OS06G0166200 PROTEIN |
| SMART | SM00355 | c2h2final6 |
| MapolyID | Mapoly0085s0068 | - |
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpC2H2-20 | transcription factor, C2H2-ZnF | Provisional |
Caution: MBEX data are analyzed based on the v7.1 genome.
Link to the original image in MBEX
Sequences: |
Gene UTR + CDS + intron |
| >Mp3g09590.1 cagagctggg gagtgtcgag tggggcactt ccagtttgtc aataatgccg tccgtcgttt ggtccatggc ataagactgt tcgaacgcga gtcatggtgg aacctcggga atcaaatagc tgttggtacc tgaagccctc aagaggagct cagagtctca agtggcagga atcgtgagct ccttctgcca ctatttcggt ggaagtgtga aggctttcgt tgcagctgct gtagaactgt acgatgtttg gtgttcggtc gagtccgttg tgggaaaaca ttgacactcc ccgggaaaag cagtgtcact gacggttgtt tcctctgagc tggctacaaa attgcaccgc tgctggtagc gatgagtggt gctgcctttg ctccaggttt gtacctttcc tcgaaatctc tttatttccg tgttcagcta gatactgtaa ctcctcggaa ccccgtccat gttaagtggt cggtgcttcc atatgtgaga atcatgtgtg ctatcaattc tcaacgtaaa gagtttatcc taaatcatca gctggttcag gcgagttccc tcgaattcga tccagggtcc agttgtctgg tttgagtttt gtcaccttac ttacgttcat atgcctaaca ggaatctgcc ccgtgccatt gtcttcgttt ccgactgaaa attgggaccg ccactgtacg ttgaaacgat ttgagaagag atttatcctt gcttgtacaa caacttctct gcgcagagct tgcagcgggg gacactattg gaattatgca cacaggccat tcggatctga agtcgaagga attagtgagg agcaggatta ttctgggaga aggacggtag gcgtgttttg ggacttagac aacaagcccc ccgttctggt gcctcctttc gatgccgcca tgaggttgag gagtctggca agcgaattcg gggaggtggt ggatatggtg gcttacgcca acaagaatgc atttacttat gttccaccct gggttaagga gcagagacag gaaaggaggt tgctggatca gttggaggtg agaggactgg ttaaagtgga gcgcccgtat atctgcaggc tctgcggtag aatgtgcaag actaatgttg ctctgaggag gcatttcaag caaatgcacg agagagagcg agaaaggaaa ttggcatatt taaaaacgct tagaggtaag aggcgagcta agttcctgag tgaccttgca gagcaggaaa tcaaatacaa agcagcagcc cggagagtgt tagtaccaaa atctggatac ggattgggtt cagagctgag aagggcaggc gtagatgtga gaacggtcga gagcaagcct caagccgctg atgaagccct gaaaaagcac attgccaatt gtatgaacaa gggagtcgag tgtatctgtc tgttatcaga tgattctgat tttttaggca ttttgaagac tgcaaagagt aagggcttga aggttgtggt ggtaggagac acttttactc tggaaaaagt tgcggatttc agtttttcgt ggcaggatgt tgcttctggt aagcttttct ttgaagccag tcttcagagg tggttgaatg atgatgcgta tcaagatgac gaaggtggtc atgatgagta tggacatggt tcgtcagcta gaagtttcca aacgcctgaa gatgtagaga ccgacgatga tcacagtgat aatgaggagg ggccttacgt ttcagaaatt gatgatgacg aggaatatga agaatacctc gcgaatttga gatggactct gcaacagagc tgaatgtgta cattgttttt ctgaagttga ataatacaca ggacaatg |
mRNA UTR + CDS |
| >Mp3g09590.1 cagagctggg gagtgtcgag tggggcactt ccagtttgtc aataatgccg tccgtcgttt ggtccatggc ataagactgt tcgaacgcga gtcatggtgg aacctcggga atcaaatagc tgttggtacc tgaagccctc aagaggagct cagagtctca agtggcagga atcgtgagct ccttctgcca ctatttcggt ggaagtgtga aggctttcgt tgcagctgct gtagaactgt acgatgtttg gtgttcggtc gagtccgttg tgggaaaaca ttgacactcc ccgggaaaag cagtgtcact gacggttgtt tcctctgagc tggctacaaa attgcaccgc tgctggtagc gatgagtggt gctgcctttg ctccaggaat ctgccccgtg ccattgtctt cgtttccgac tgaaaattgg gaccgccact gtacgttgaa acgatttgag aagagattta tccttgcttg tacaacaact tctctgcgca gagcttgcag cgggggacac tattggaatt atgcacacag gccattcgga tctgaagtcg aaggaattag tgaggagcag gattattctg ggagaaggac ggtaggcgtg ttttgggact tagacaacaa gccccccgtt ctggtgcctc ctttcgatgc cgccatgagg ttgaggagtc tggcaagcga attcggggag gtggtggata tggtggctta cgccaacaag aatgcattta cttatgttcc accctgggtt aaggagcaga gacaggaaag gaggttgctg gatcagttgg aggtgagagg actggttaaa gtggagcgcc cgtatatctg caggctctgc ggtagaatgt gcaagactaa tgttgctctg aggaggcatt tcaagcaaat gcacgagaga gagcgagaaa ggaaattggc atatttaaaa acgcttagag gtaagaggcg agctaagttc ctgagtgacc ttgcagagca ggaaatcaaa tacaaagcag cagcccggag agtgttagta ccaaaatctg gatacggatt gggttcagag ctgagaaggg caggcgtaga tgtgagaacg gtcgagagca agcctcaagc cgctgatgaa gccctgaaaa agcacattgc caattgtatg aacaagggag tcgagtgtat ctgtctgtta tcagatgatt ctgatttttt aggcattttg aagactgcaa agagtaaggg cttgaaggtt gtggtggtag gagacacttt tactctggaa aaagttgcgg atttcagttt ttcgtggcag gatgttgctt ctggtaagct tttctttgaa gccagtcttc agaggtggtt gaatgatgat gcgtatcaag atgacgaagg tggtcatgat gagtatggac atggttcgtc agctagaagt ttccaaacgc ctgaagatgt agagaccgac gatgatcaca gtgataatga ggaggggcct tacgtttcag aaattgatga tgacgaggaa tatgaagaat acctcgcgaa tttgagatgg actctgcaac agagctgaat gtgtacattg tttttctgaa gttgaataat acacaggaca atg |
CDS |
| >Mp3g09590.1 atgagtggtg ctgcctttgc tccaggaatc tgccccgtgc cattgtcttc gtttccgact gaaaattggg accgccactg tacgttgaaa cgatttgaga agagatttat ccttgcttgt acaacaactt ctctgcgcag agcttgcagc gggggacact attggaatta tgcacacagg ccattcggat ctgaagtcga aggaattagt gaggagcagg attattctgg gagaaggacg gtaggcgtgt tttgggactt agacaacaag ccccccgttc tggtgcctcc tttcgatgcc gccatgaggt tgaggagtct ggcaagcgaa ttcggggagg tggtggatat ggtggcttac gccaacaaga atgcatttac ttatgttcca ccctgggtta aggagcagag acaggaaagg aggttgctgg atcagttgga ggtgagagga ctggttaaag tggagcgccc gtatatctgc aggctctgcg gtagaatgtg caagactaat gttgctctga ggaggcattt caagcaaatg cacgagagag agcgagaaag gaaattggca tatttaaaaa cgcttagagg taagaggcga gctaagttcc tgagtgacct tgcagagcag gaaatcaaat acaaagcagc agcccggaga gtgttagtac caaaatctgg atacggattg ggttcagagc tgagaagggc aggcgtagat gtgagaacgg tcgagagcaa gcctcaagcc gctgatgaag ccctgaaaaa gcacattgcc aattgtatga acaagggagt cgagtgtatc tgtctgttat cagatgattc tgatttttta ggcattttga agactgcaaa gagtaagggc ttgaaggttg tggtggtagg agacactttt actctggaaa aagttgcgga tttcagtttt tcgtggcagg atgttgcttc tggtaagctt ttctttgaag ccagtcttca gaggtggttg aatgatgatg cgtatcaaga tgacgaaggt ggtcatgatg agtatggaca tggttcgtca gctagaagtt tccaaacgcc tgaagatgta gagaccgacg atgatcacag tgataatgag gaggggcctt acgtttcaga aattgatgat gacgaggaat atgaagaata cctcgcgaat ttgagatgga ctctgcaaca gagctga |
Protein |
| >Mp3g09590.1 MSGAAFAPGI CPVPLSSFPT ENWDRHCTLK RFEKRFILAC TTTSLRRACS GGHYWNYAHR PFGSEVEGIS EEQDYSGRRT VGVFWDLDNK PPVLVPPFDA AMRLRSLASE FGEVVDMVAY ANKNAFTYVP PWVKEQRQER RLLDQLEVRG LVKVERPYIC RLCGRMCKTN VALRRHFKQM HERERERKLA YLKTLRGKRR AKFLSDLAEQ EIKYKAAARR VLVPKSGYGL GSELRRAGVD VRTVESKPQA ADEALKKHIA NCMNKGVECI CLLSDDSDFL GILKTAKSKG LKVVVVGDTF TLEKVADFSF SWQDVASGKL FFEASLQRWL NDDAYQDDEG GHDEYGHGSS ARSFQTPEDV ETDDDHSDNE EGPYVSEIDD DEEYEEYLAN LRWTLQQS |
Sequences: |
Gene UTR + CDS + intron |
| >Mp3g09590.2 cagagctggg gagtgtcgag tggggcactt ccagtttgtc aataatgccg tccgtcgttt ggtccatggc ataagactgt tcgaacgcga gtcatggtgg aacctcggga atcaaatagc tgttggtacc tgaagccctc aagaggagct cagagtctca agtggcagga atcgtgagct ccttctgcca ctatttcggt ggaagtgtga aggctttcgt tgcagctgct gtagaactgt acgatgtttg gtgttcggtc gagtccgttg tgggaaaaca ttgacactcc ccgggaaaag cagtgtcact gacggttgtt tcctctgagc tggctacaaa attgcaccgc tgctggtagc gatgagtggt gctgcctttg ctccaggttt gtacctttcc tcgaaatctc tttatttccg tgttcagcta gatactgtaa ctcctcggaa ccccgtccat gttaagtggt cggtgcttcc atatgtgaga atcatgtgtg ctatcaattc tcaacgtaaa gagtttatcc taaatcatca gctggttcag gcgagttccc tcgaattcga tccagggtcc agttgtctgg tttgagtttt gtcaccttac ttacgttcat atgcctaaca ggaatctgcc ccgtgccatt gtcttcgttt ccgactgaaa attgggaccg ccactgtacg ttgaaacgat ttgagaagag atttatcctt gcttgtacaa caacttctct gcgcagagct tgcagcgggg gacactattg gaattatgca cacaggccat tcggatctga agtcgaagga attagtgagg agcaggatta ttctgggaga aggacggtag gcgtgttttg ggacttagac aacaagcccc ccgttctggt gcctcctttc gatgccgcca tgaggttgag gagtctggca agcgaattcg gggaggtggt ggatatggtg gcttacgcca acaagaatgc atttacttat gttccaccct gggttaagga gcagagacag gaaaggaggt tgctggatca gttggaggtg agaggactgg ttaaagtgga gcgcccgtat atctgcaggc tctgcggtag aatgtgcaag actaatgttg ctctgaggag gcatttcaag caaatgcacg agagagagcg agaaaggaaa ttggcatatt taaaaacgct tagaggtaag aggcgagcta agttcctgag tgaccttgca gagcaggaaa tcaaatacaa agcagcagcc cggagagtgt tagtaccaaa atctggatac ggattgggtt cagagctgag aagggcaggc gtagatgtga gaacggtcga gagcaagcct caagccgctg atgaagccct gaaaaagcac attgccaatt gtatgaacaa gggagtcgag tgtatctgtc tgttatcaga tgattctgat tttttaggca ttttgaagac tgcaaagagt aagggcttga aggttgtggt ggtaggagac acttttactc tggaaaaagt tgcggatttc agtttttcgt ggcaggatgt tgcttctggt aagcttttct ttgaagccag tcttcagagg tggttgaatg atgatgcgta tcaagatgac gaaggtggtc atgatgagta tggacatggt tcgtcagcta gaagtttcca aacgcctgaa gatgtagaga ccgacgatga tcacagtgat aatgaggagg ggccttacgt ttcagaaatt gatgatgacg aggaatatga agaatacctc gcgaatttga gatggactct gcaacagagc tgaatgtgta cattgttttt ctgaagttga ataatacaca ggacaatgct aagctcttat caataatctt gaaaagaaga aaaagatggg aactgtccaa atttgattcc tgtttctgta gaaacacttc cacgtctggc tttcctcgtg ttactgatcc ccttctgccg tctccttctg tggccttaac ttgcgacaca tcccaataac ttcgaattgt caagtctggc ttaagagctt tcttcggtat atgtcatgta aaagcctcct ttccttttta actcttctca gtaactgaat agttcctgca tttggaaacc ggacctacat ttggacatgc tcaaaagcca agacgtcact tgtcctccca tctttccggg aatttgttct gtgatcactt cttccgatac agtggaagtg atgagcaggt atcatgtttg gaggatgcct ttcctatgta caacataaga agattctttc tcatttggaa gttctgcact ggtcaccgaa agcttttgac ttcatgtaga cagttgtctg tatgactcta tgtctccttg tagtagaagt gaggtggatt tgacagtgac tttatatacc tttagtttgt aggacagtgt cacatccata cactctgcga tgataaactc atcggtcatg atacaatgaa tgccaggatg ttgagaactt tgttgtctct ttgtacagga atatatgtat atgatgtgta tcgttccagg gacagaggaa gatttatgac tggtgttgaa ccgatcagtt tcgaagcgag agtggatcat cccaaatgct ggatggtaat tgaaagaaca tgacagcatc ttgacgaaga ggtgtcgaag atcacagact cttcaactgc aatgcttgac ccgaatacca gattggattt tctggaaatt cataaataca agattgtttg cggtactgct gggagccttc gaatataaaa ggcctcgtcc tcaacgttta ttaatggtgg gctgatcaga atcaatgtac aggaggaacc tctccaaatt tcgataacta gccagagtta aatcttgggc gtctagtagt aatcataaca gttggtttga tagttatgtc agatagaggg aacgttcgtg ttgtacagtt ttccaagcag gatcccaaag ggagagcaac ttctgtccac gggactccta gtacttgacc cgaattttta cttcaaatgg agtcgaggtt tcgtggtcca gaggcatact ttgtattttc cttttcggtc cacataacag tcaccttctt ttttaatcta attaccccca acagcgaagt gcagccttca agctgggata cgaacgactt gccttggcta ggcactggtc tcggagtcta ctcacgatgt tctcaaagct gacctctgga tgataatttt ttctcccact gaaaaccaga aagaggaaag gaatggaatt taaacccaga atgcgaaacc cgagtattgt tatgggattt aaacccaggt caa |
mRNA UTR + CDS |
| >Mp3g09590.2 cagagctggg gagtgtcgag tggggcactt ccagtttgtc aataatgccg tccgtcgttt ggtccatggc ataagactgt tcgaacgcga gtcatggtgg aacctcggga atcaaatagc tgttggtacc tgaagccctc aagaggagct cagagtctca agtggcagga atcgtgagct ccttctgcca ctatttcggt ggaagtgtga aggctttcgt tgcagctgct gtagaactgt acgatgtttg gtgttcggtc gagtccgttg tgggaaaaca ttgacactcc ccgggaaaag cagtgtcact gacggttgtt tcctctgagc tggctacaaa attgcaccgc tgctggtagc gatgagtggt gctgcctttg ctccaggaat ctgccccgtg ccattgtctt cgtttccgac tgaaaattgg gaccgccact gtacgttgaa acgatttgag aagagattta tccttgcttg tacaacaact tctctgcgca gagcttgcag cgggggacac tattggaatt atgcacacag gccattcgga tctgaagtcg aaggaattag tgaggagcag gattattctg ggagaaggac ggtaggcgtg ttttgggact tagacaacaa gccccccgtt ctggtgcctc ctttcgatgc cgccatgagg ttgaggagtc tggcaagcga attcggggag gtggtggata tggtggctta cgccaacaag aatgcattta cttatgttcc accctgggtt aaggagcaga gacaggaaag gaggttgctg gatcagttgg aggtgagagg actggttaaa gtggagcgcc cgtatatctg caggctctgc ggtagaatgt gcaagactaa tgttgctctg aggaggcatt tcaagcaaat gcacgagaga gagcgagaaa ggaaattggc atatttaaaa acgcttagag gtaagaggcg agctaagttc ctgagtgacc ttgcagagca ggaaatcaaa tacaaagcag cagcccggag agtgttagta ccaaaatctg gatacggatt gggttcagag ctgagaaggg caggcgtaga tgtgagaacg gtcgagagca agcctcaagc cgctgatgaa gccctgaaaa agcacattgc caattgtatg aacaagggag tcgagtgtat ctgtctgtta tcagatgatt ctgatttttt aggcattttg aagactgcaa agagtaaggg cttgaaggtt gtggtggtag gagacacttt tactctggaa aaagttgcgg atttcagttt ttcgtggcag gatgttgctt ctggaatata tgtatatgat gtgtatcgtt ccagggacag aggaagattt atgactggtg ttgaaccgat cagtttcgaa gcgagagtgg atcatcccaa atgctggatg gtaattgaaa gaacatgaca gcatcttgac gaagaggtgt cgaagatcac agactcttca actgcaatgc ttgacccgaa taccagattg gattttctgg aaattcataa atacaagatt gtttgcggta ctgctgggag ccttcgaata taaaaggcct cgtcctcaac gtttattaat ggtgggctga tcagaatcaa tgtacaggag gaacctctcc aaatttcgat aactagccag agttaaatct tgggcgtcta gtagtaatca taacagttgg tttgatagtt atgtcagata gagggaacgt tcgtgttgta cagttttcca agcaggatcc caaagggaga gcaacttctg tccacgggac tcctagtact tgacccgaat ttttacttca aatggagtcg aggtttcgtg gtccagaggc atactttgta ttttcctttt cggtccacat aacagtcacc ttctttttta atctaattac ccccaacagc gaagtgcagc cttcaagctg ggatacgaac gacttgcctt ggctaggcac tggtctcgga gtctactcac gatgttctca aagctgacct ctggatgata attttttctc ccactgaaaa ccagaaagag gaaaggaatg gaatttaaac ccagaatgcg aaacccgagt attgttatgg gatttaaacc caggtcaa |
CDS |
| >Mp3g09590.2 atgagtggtg ctgcctttgc tccaggaatc tgccccgtgc cattgtcttc gtttccgact gaaaattggg accgccactg tacgttgaaa cgatttgaga agagatttat ccttgcttgt acaacaactt ctctgcgcag agcttgcagc gggggacact attggaatta tgcacacagg ccattcggat ctgaagtcga aggaattagt gaggagcagg attattctgg gagaaggacg gtaggcgtgt tttgggactt agacaacaag ccccccgttc tggtgcctcc tttcgatgcc gccatgaggt tgaggagtct ggcaagcgaa ttcggggagg tggtggatat ggtggcttac gccaacaaga atgcatttac ttatgttcca ccctgggtta aggagcagag acaggaaagg aggttgctgg atcagttgga ggtgagagga ctggttaaag tggagcgccc gtatatctgc aggctctgcg gtagaatgtg caagactaat gttgctctga ggaggcattt caagcaaatg cacgagagag agcgagaaag gaaattggca tatttaaaaa cgcttagagg taagaggcga gctaagttcc tgagtgacct tgcagagcag gaaatcaaat acaaagcagc agcccggaga gtgttagtac caaaatctgg atacggattg ggttcagagc tgagaagggc aggcgtagat gtgagaacgg tcgagagcaa gcctcaagcc gctgatgaag ccctgaaaaa gcacattgcc aattgtatga acaagggagt cgagtgtatc tgtctgttat cagatgattc tgatttttta ggcattttga agactgcaaa gagtaagggc ttgaaggttg tggtggtagg agacactttt actctggaaa aagttgcgga tttcagtttt tcgtggcagg atgttgcttc tggaatatat gtatatgatg tgtatcgttc cagggacaga ggaagattta tgactggtgt tgaaccgatc agtttcgaag cgagagtgga tcatcccaaa tgctggatgg taattgaaag aacatga |
Protein |
| >Mp3g09590.2 MSGAAFAPGI CPVPLSSFPT ENWDRHCTLK RFEKRFILAC TTTSLRRACS GGHYWNYAHR PFGSEVEGIS EEQDYSGRRT VGVFWDLDNK PPVLVPPFDA AMRLRSLASE FGEVVDMVAY ANKNAFTYVP PWVKEQRQER RLLDQLEVRG LVKVERPYIC RLCGRMCKTN VALRRHFKQM HERERERKLA YLKTLRGKRR AKFLSDLAEQ EIKYKAAARR VLVPKSGYGL GSELRRAGVD VRTVESKPQA ADEALKKHIA NCMNKGVECI CLLSDDSDFL GILKTAKSKG LKVVVVGDTF TLEKVADFSF SWQDVASGIY VYDVYRSRDR GRFMTGVEPI SFEARVDHPK CWMVIERT |