Mp3g21620



Description

Annotation

Database ID Description
KOG KOG4422 Uncharacterized conserved protein; N-term missing; C-term missing; [S]
Pfam PF13812 Pentatricopeptide repeat domain
SMART SM00463 SMR_2
ProSiteProfiles PS51375 Pentatricopeptide (PPR) repeat profile.
ProSiteProfiles PS50828 Smr domain profile.
TIGRFAM TIGR00756 PPR: pentatricopeptide repeat domain
Pfam PF13041 PPR repeat family
MobiDBLite mobidb-lite consensus disorder prediction
PANTHER PTHR47447:SF4 BNAA07G31720D PROTEIN
SUPERFAMILY SSF81901 HCP-like
PANTHER PTHR47447 OS03G0856100 PROTEIN
SUPERFAMILY SSF160443 SMR domain-like
Gene3D G3DSA:1.25.40.10 -
Pfam PF01535 PPR repeat
SUPERFAMILY SSF48452 TPR-like
GO GO:0005515 protein binding
MapolyID Mapoly0089s0054 -

Nomenclature

Gene symbol Product Transcript ID Status
MpPPR_71 Pentatricopeptide repeat proteins Published

Transcript models

Transcript ID Location Sequences Extract region
Mp3g21620.1 chr3:22495265..22500084 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.