| Database | ID | Description |
|---|---|---|
| KOG | KOG1677 | CCCH-type Zn-finger protein; N-term missing; C-term missing; [R] |
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| ProSiteProfiles | PS50103 | Zinc finger C3H1-type profile. |
| Pfam | PF00642 | Zinc finger C-x8-C-x5-C-x3-H type (and similar) |
| SUPERFAMILY | SSF90229 | CCCH zinc finger |
| Gene3D | G3DSA:4.10.1000.10 | CCCH zinc finger |
| SMART | SM00356 | c3hfinal6 |
| Pfam | PF18044 | CCCH-type zinc finger |
| PANTHER | PTHR12547 | CCCH ZINC FINGER/TIS11-RELATED |
| PANTHER | PTHR12547:SF136 | ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 12-LIKE |
| GO | GO:0046872 | metal ion binding |
| MapolyID | Mapoly0121s0050 | - |
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpC3H12 | transcription factor, C3H | Provisional |
Caution: MBEX data are analyzed based on the v7.1 genome.
Link to the original image in MBEX
Sequences: |
Gene UTR + CDS + intron |
| >Mp3g23720.1 gatgtggttt ggtgtggtgt gaggtgctgt gctggttatc cgtgattggt gtgaaaatga ataatatacg tagctgcagg atcgacgagg aacgcaatgt gacatcagtc cgagggagag aggagaagaa aaactcattc cctgggtctt gcttcgacgc aagtgttctc tctctttttt ctctctttct cgccccatct tgcgtctgta aactacgcaa gcgctggaac ctcgaccgaa ccgggaaggc gtttcttata aaatttgccg agtctacggc gtttgattgc cctgtcatgt caacgcacga cagatgtcgc tgagatgtag cgaagtccgg ctttgtatgg tcaggtatta tccgtatgtg tgattttttc tccttcgaga ggaagacagc acttcgacga agaaagtcgg gacctgggat ctcaaatctg tctgttgtac atatgtaacc taagaaatcg aagagtgtat gtatgtatca gatcgattga cagaatcgag aagagagggg aatggacaca actgctgctg cagagttagg aggtggagtt gtcgagggag gggtcgggta ctgggattcc ggagtagaag cagacggagg atggaatgac aaagggacgg caggtcaatc tgcagcctcg tgggcaaacg gggctgaagg aggagcggga gggggtcatg gccgagggag tcgacctgct gcagagaacg agcctccttt caaaaggatg aagaatatgg gaggggcaga tggagcacct tatggacccg gatctggaaa ctttaacaac aacggttcag gttccaacgc tgggcatggt ggaaatgccg gaggcttcgg tccaggcccc ggaggcagcc cgagcttgaa aggttatgga tcaggaggaa taggaccctc cccagggact ccgagtggag actctgtggc aggttccagc caagggcagc aagctggagc gtcgagaggt agaggaatgg ggagcatatt ttacaagact aagttgtgca gcagattcag gaacggtaat tgtccttaca acacaaattg taattttgcg catggtatgg aagagcttcg taaaccacct cctggctggg aagatgtggt tgctgcccaa gagggcggag gaggaggggc tgctgccccc tctgcagcta ctcagccgtc tgtccagggt tcgaatggag ggaatggaga acgaacgggc ggtgttggag caggaagagg aggaggagga ggaggaggag gaggaggagg ggggaacgca gttggagacg gagtaaatat ctctgatatg caaagatttc ataagactcg tccttgcaag aagtatttca gtgaactggg gtgcccgtat ggagatagat gtaattttct gcatgatgag cagactccac aacctaaggt cccgagagaa agtgtagtaa ttactgtggc atctagtgct ggtgcatcag ggagtggtgg tggtggtggt gtgggaggtg tagctggagg aaccgcgaac ctacggcctc caaactggaa aacccgtttg tgcaataagt gggaaaccac gggaaactgt ccatttgggg acaaatgtca ctttgcacac ggtacagcag gttcggcgac ttactgtttg cctcatcgtg atggtatctt tttaaacgtt ctcacttgcg tggtcaattc cttcatttcc tgttatccca tgtggtaagc tatgtttttc aggctctaga gaatacccac tcgaaaagaa ggacctacga tgattttcag ctgtttgctc ctctctatat cgattggcat ttggtctttg tgatttaatt gatgtggaat gtcacttctg aatcgatata actacttgaa tgcaaatgaa gctatatgga tagaaacttg actggaagct cagtccttgg gttttgagtt ttaattctga aggtttcata tctacaactt gtacgaccat aagctctggc tttttcctgt atgcgtcggg attcttgagt caaatgtcga ctgacctcgg agcgatggat ttgtttttgc atcccctagt tcgttaccaa cagattgata taggatttgc taaactctga gatattttct tcttatagac accattgtct caataaccac ggtgtagttc atgaagccga aagattcatg taaagcgcgt tcatttcatt aactaagtct ttatcattaa atcgtgcttc tgtcgccatg cagagctgca aaaatacggt ggaggtccgt ttgaccctac tgccgaaatg ggttccggag ttcaagttga tagcaagttc gtgttgaacc agtccagtaa ctttcttgac ggcgatgatg tcttcttttc atctttcggc gatggctatg gtcaagtaat gaacgtacgg caatcaaccg ctgcatctat acagcaaaat tcgaggctga accaggggcc cggagtagga tataagtctc tgggaggctg gaaaggacca acagatagaa tctctaccat atacggagac tgggtagagg atgaagagtg ggaacaatca ccagtgcatg ttatcaagtc tgctcagcag caagtacaac ccaatcaagc atatcaagag gcagctgact atccacaaag tgagatcggt cccactaggg acaggggagg cttgagcaca tcttatggta tgtacagcaa tggccaggaa gtaacaggcc aaaagtccag tcttaaccaa ggcaatgggt ttacaagttc ttcaagagtt acacggcttc atgctcaagg tcttcagggg gctgatatgg cttatgctgc gcaggagcgt ggttctgaca atcattacaa tgggacacag ggctggggag gagagctgta agtgaaattt tgtttttctt tacacgacgg tcgtgggcat ctttctgtaa tccctcccta cccctcaact gctttgattt actgctttta atcctggttt tggtaggcca gcttcttggt ctaccttctt gatcaatatt tgaagagctg tatatcaact caaaatgtga gttgaggcag tgtcacatgg tcggagctaa tcaaagagaa aaaggtgaag gcacagaggt gattcgtgat gatggaggtg tcttgacttg tctcacactg cacagcagtc tcctcgtggt gatcctcaag ttgtcgttta cgtgctgtcg ttgcttgaca tgttacagag tgtcacattg cgcagctatg atgtcatgat ggtcgtacat gtagtgtatt ttaggaggca gcatattgaa tctaccaagt catgacaatt ctggcatcga taaaagttat catcacgtgt attaggtggg cgttttatct ctcgatctag attctgcggg actaaaagtt atcagtcatt gaatcgttgt caacgatccc tcgatcttgt tttccttggt tcatgtaaat tccctcgcgg cgttctcaag actggttggg atttgcttct ggaaaccgcc aacatctatt gacatatatc aaggactcgt agctgttcag catgtcattg ttccagagag cagaagcccg taaagaaaat cctgcacgat cgacagagta gtatctgaag tatacgaaca agagtctcct ggcagaacct ttatacgttt caggtttcta ggtatgattg tgttgggctg ctacaaagga ggagccacca cgaaggtaaa gttgattaca cccttgaaat gccatcatgt gatcatcgta agcagatcat taaatttctg tgccggtggc ttaatgatat cttacacata gatcactgcc cccgtattgt tgtcacgggt gtaatctagg cgtagagtca gcacgaaagg tgaagtataa aattctacgt ttccagtgtt gaatgtgtgc attctgtcat ttccagatca gatactgcat tacggagggg aactcagtgt gctttaaaaa atgtcggagc tgcccgagat tacttaccag acttcaatat ttgaactagt ttattgtgtg aggttacgga cttcacatgt ctgcctagat gacagctttg gttgtcgaag cccctatgtt taaatgttta tttgaccttc ataacgccct aggactctgt tgtcttaaaa aacgtggaaa ttgcccaact tggatctaca tcaaggctcc acaaacggcc tgacaaggac aacgacgttt tctaaggtgg tcagatatgg aggtcatcgc agtgaagccc tatcatttat gtgaagtagg ggccgagatt cttcacctcc acactgtcgg cagcatatct ggccgattcg ctttgacact tgttacccag cggacagcac cacctccagg agattccttt tctgcaatgg aggtctgcaa cctatcgaat cacaccgcca tgtacgcttc tattttggga aataaggttt tgtccacaag aactttctac cccgaagtgc atgcggtatg atccctggga ccatatacag tacgacatcg actttacgac gcattatggt gttgccagac tacataacaa cgaggaccat ggaccatgca ggcaacgcta gcaaatatga gaattcaaga agctctc |
mRNA UTR + CDS |
| >Mp3g23720.1 gatgtggttt ggtgtggtgt gaggtgctgt gctggttatc cgtgattggt gtgaaaatga ataatatacg tagctgcagg atcgacgagg aacgcaatgt gacatcagtc cgagggagag aggagaagaa aaactcattc cctgggtctt gcttcgacgc aagtgttctc tctctttttt ctctctttct cgccccatct tgcgtctgta aactacgcaa gcgctggaac ctcgaccgaa ccgggaaggc gtttcttata aaatttgccg agtctacggc gtttgattgc cctgtcatgt caacgcacga cagatgtcgc tgagatgtag cgaagtccgg ctttgtatgg tcaggtatta tccgtatgtg tgattttttc tccttcgaga ggaagacagc acttcgacga agaaagtcgg gacctgggat ctcaaatctg tctgttgtac atatgtaacc taagaaatcg aagagtgtat gtatgtatca gatcgattga cagaatcgag aagagagggg aatggacaca actgctgctg cagagttagg aggtggagtt gtcgagggag gggtcgggta ctgggattcc ggagtagaag cagacggagg atggaatgac aaagggacgg caggtcaatc tgcagcctcg tgggcaaacg gggctgaagg aggagcggga gggggtcatg gccgagggag tcgacctgct gcagagaacg agcctccttt caaaaggatg aagaatatgg gaggggcaga tggagcacct tatggacccg gatctggaaa ctttaacaac aacggttcag gttccaacgc tgggcatggt ggaaatgccg gaggcttcgg tccaggcccc ggaggcagcc cgagcttgaa aggttatgga tcaggaggaa taggaccctc cccagggact ccgagtggag actctgtggc aggttccagc caagggcagc aagctggagc gtcgagaggt agaggaatgg ggagcatatt ttacaagact aagttgtgca gcagattcag gaacggtaat tgtccttaca acacaaattg taattttgcg catggtatgg aagagcttcg taaaccacct cctggctggg aagatgtggt tgctgcccaa gagggcggag gaggaggggc tgctgccccc tctgcagcta ctcagccgtc tgtccagggt tcgaatggag ggaatggaga acgaacgggc ggtgttggag caggaagagg aggaggagga ggaggaggag gaggaggagg ggggaacgca gttggagacg gagtaaatat ctctgatatg caaagatttc ataagactcg tccttgcaag aagtatttca gtgaactggg gtgcccgtat ggagatagat gtaattttct gcatgatgag cagactccac aacctaaggt cccgagagaa agtgtagtaa ttactgtggc atctagtgct ggtgcatcag ggagtggtgg tggtggtggt gtgggaggtg tagctggagg aaccgcgaac ctacggcctc caaactggaa aacccgtttg tgcaataagt gggaaaccac gggaaactgt ccatttgggg acaaatgtca ctttgcacac ggtacagcag agctgcaaaa atacggtgga ggtccgtttg accctactgc cgaaatgggt tccggagttc aagttgatag caagttcgtg ttgaaccagt ccagtaactt tcttgacggc gatgatgtct tcttttcatc tttcggcgat ggctatggtc aagtaatgaa cgtacggcaa tcaaccgctg catctataca gcaaaattcg aggctgaacc aggggcccgg agtaggatat aagtctctgg gaggctggaa aggaccaaca gatagaatct ctaccatata cggagactgg gtagaggatg aagagtggga acaatcacca gtgcatgtta tcaagtctgc tcagcagcaa gtacaaccca atcaagcata tcaagaggca gctgactatc cacaaagtga gatcggtccc actagggaca ggggaggctt gagcacatct tatggtatgt acagcaatgg ccaggaagta acaggccaaa agtccagtct taaccaaggc aatgggttta caagttcttc aagagttaca cggcttcatg ctcaaggtct tcagggggct gatatggctt atgctgcgca ggagcgtggt tctgacaatc attacaatgg gacacagggc tggggaggag agctgtaagt gaaattttgt ttttctttac acgacggtcg tgggcatctt tctgtaatcc ctccctaccc ctcaactgct ttgatttact gcttttaatc ctggttttgg taggccagct tcttggtcta ccttcttgat caatatttga agagctgtat atcaactcaa aatgtgagtt gaggcagtgt cacatggtcg gagctaatca aagagaaaaa ggtgaaggca cagaggtgat tcgtgatgat ggaggtgtct tgacttgtct cacactgcac agcagtctcc tcgtggtgat cctcaagttg tcgtttacgt gctgtcgttg cttgacatgt tacagagtgt cacattgcgc agctatgatg tcatgatggt cgtacatgta gtgtatttta ggaggcagca tattgaatct accaagtcat gacaattctg gcatcgataa aagttatcat cacgtgtatt aggtgggcgt tttatctctc gatctagatt ctgcgggact aaaagttatc agtcattgaa tcgttgtcaa cgatccctcg atcttgtttt ccttggttca tgtaaattcc ctcgcggcgt tctcaagact ggttgggatt tgcttctgga aaccgccaac atctattgac atatatcaag gactcgtagc tgttcagcat gtcattgttc cagagagcag aagcccgtaa agaaaatcct gcacgatcga cagagtagta tctgaagtat acgaacaaga gtctcctggc agaaccttta tacgtttcag gtttctaggt atgattgtgt tgggctgcta caaaggagga gccaccacga aggtaaagtt gattacaccc ttgaaatgcc atcatgtgat catcgtaagc agatcattaa atttctgtgc cggtggctta atgatatctt acacatagat cactgccccc gtattgttgt cacgggtgta atctaggcgt agagtcagca cgaaaggtga agtataaaat tctacgtttc cagtgttgaa tgtgtgcatt ctgtcatttc cagatcagat actgcattac ggaggggaac tcagtgtgct ttaaaaaatg tcggagctgc ccgagattac ttaccagact tcaatatttg aactagttta ttgtgtgagg ttacggactt cacatgtctg cctagatgac agctttggtt gtcgaagccc ctatgtttaa atgtttattt gaccttcata acgccctagg actctgttgt cttaaaaaac gtggaaattg cccaacttgg atctacatca aggctccaca aacggcctga caaggacaac gacgttttct aaggtggtca gatatggagg tcatcgcagt gaagccctat catttatgtg aagtaggggc cgagattctt cacctccaca ctgtcggcag catatctggc cgattcgctt tgacacttgt tacccagcgg acagcaccac ctccaggaga ttccttttct gcaatggagg tctgcaacct atcgaatcac accgccatgt acgcttctat tttgggaaat aaggttttgt ccacaagaac tttctacccc gaagtgcatg cggtatgatc cctgggacca tatacagtac gacatcgact ttacgacgca ttatggtgtt gccagactac ataacaacga ggaccatgga ccatgcaggc aacgctagca aatatgagaa ttcaagaagc tctc |
CDS |
| >Mp3g23720.1 atggacacaa ctgctgctgc agagttagga ggtggagttg tcgagggagg ggtcgggtac tgggattccg gagtagaagc agacggagga tggaatgaca aagggacggc aggtcaatct gcagcctcgt gggcaaacgg ggctgaagga ggagcgggag ggggtcatgg ccgagggagt cgacctgctg cagagaacga gcctcctttc aaaaggatga agaatatggg aggggcagat ggagcacctt atggacccgg atctggaaac tttaacaaca acggttcagg ttccaacgct gggcatggtg gaaatgccgg aggcttcggt ccaggccccg gaggcagccc gagcttgaaa ggttatggat caggaggaat aggaccctcc ccagggactc cgagtggaga ctctgtggca ggttccagcc aagggcagca agctggagcg tcgagaggta gaggaatggg gagcatattt tacaagacta agttgtgcag cagattcagg aacggtaatt gtccttacaa cacaaattgt aattttgcgc atggtatgga agagcttcgt aaaccacctc ctggctggga agatgtggtt gctgcccaag agggcggagg aggaggggct gctgccccct ctgcagctac tcagccgtct gtccagggtt cgaatggagg gaatggagaa cgaacgggcg gtgttggagc aggaagagga ggaggaggag gaggaggagg aggaggaggg gggaacgcag ttggagacgg agtaaatatc tctgatatgc aaagatttca taagactcgt ccttgcaaga agtatttcag tgaactgggg tgcccgtatg gagatagatg taattttctg catgatgagc agactccaca acctaaggtc ccgagagaaa gtgtagtaat tactgtggca tctagtgctg gtgcatcagg gagtggtggt ggtggtggtg tgggaggtgt agctggagga accgcgaacc tacggcctcc aaactggaaa acccgtttgt gcaataagtg ggaaaccacg ggaaactgtc catttgggga caaatgtcac tttgcacacg gtacagcaga gctgcaaaaa tacggtggag gtccgtttga ccctactgcc gaaatgggtt ccggagttca agttgatagc aagttcgtgt tgaaccagtc cagtaacttt cttgacggcg atgatgtctt cttttcatct ttcggcgatg gctatggtca agtaatgaac gtacggcaat caaccgctgc atctatacag caaaattcga ggctgaacca ggggcccgga gtaggatata agtctctggg aggctggaaa ggaccaacag atagaatctc taccatatac ggagactggg tagaggatga agagtgggaa caatcaccag tgcatgttat caagtctgct cagcagcaag tacaacccaa tcaagcatat caagaggcag ctgactatcc acaaagtgag atcggtccca ctagggacag gggaggcttg agcacatctt atggtatgta cagcaatggc caggaagtaa caggccaaaa gtccagtctt aaccaaggca atgggtttac aagttcttca agagttacac ggcttcatgc tcaaggtctt cagggggctg atatggctta tgctgcgcag gagcgtggtt ctgacaatca ttacaatggg acacagggct ggggaggaga gctgtaa |
Protein |
| >Mp3g23720.1 MDTTAAAELG GGVVEGGVGY WDSGVEADGG WNDKGTAGQS AASWANGAEG GAGGGHGRGS RPAAENEPPF KRMKNMGGAD GAPYGPGSGN FNNNGSGSNA GHGGNAGGFG PGPGGSPSLK GYGSGGIGPS PGTPSGDSVA GSSQGQQAGA SRGRGMGSIF YKTKLCSRFR NGNCPYNTNC NFAHGMEELR KPPPGWEDVV AAQEGGGGGA AAPSAATQPS VQGSNGGNGE RTGGVGAGRG GGGGGGGGGG GNAVGDGVNI SDMQRFHKTR PCKKYFSELG CPYGDRCNFL HDEQTPQPKV PRESVVITVA SSAGASGSGG GGGVGGVAGG TANLRPPNWK TRLCNKWETT GNCPFGDKCH FAHGTAELQK YGGGPFDPTA EMGSGVQVDS KFVLNQSSNF LDGDDVFFSS FGDGYGQVMN VRQSTAASIQ QNSRLNQGPG VGYKSLGGWK GPTDRISTIY GDWVEDEEWE QSPVHVIKSA QQQVQPNQAY QEAADYPQSE IGPTRDRGGL STSYGMYSNG QEVTGQKSSL NQGNGFTSSS RVTRLHAQGL QGADMAYAAQ ERGSDNHYNG TQGWGGEL |