Mp4g08690



Description

Annotation

Database ID Description
KOG KOG1946 RNA polymerase I transcription factor UAF; [K]
KOG KOG1862 GYF domain containing proteins; N-term missing; C-term missing; [R]
KOG KOG1081 Transcription factor NSD1 and related SET domain proteins; C-term missing; [K]
KOG KOG2402 Paf1/RNA polymerase II complex, RTF1 component (involved in regulation of TATA box-binding protein); N-term missing; C-term missing; [K]
CDD cd10567 SWIB-MDM2_like
Gene3D G3DSA:3.30.1490.40 -
Gene3D G3DSA:2.170.260.30 -
SMART SM00444 gyf_5
SUPERFAMILY SSF90229 CCCH zinc finger
Pfam PF02201 SWIB/MDM2 domain
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF00642 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
PANTHER PTHR13115 UNCHARACTERIZED
SUPERFAMILY SSF159042 Plus3-like
SMART SM00151 swib_2
ProSiteProfiles PS50103 Zinc finger C3H1-type profile.
ProSitePatterns PS01359 Zinc finger PHD-type signature.
SUPERFAMILY SSF55277 GYF domain
SMART SM00249 PHD_3
Gene3D G3DSA:1.10.245.10 MDM2
ProSiteProfiles PS50829 GYF domain profile.
ProSiteProfiles PS51360 Plus3 domain profile.
SUPERFAMILY SSF47592 SWIB/MDM2 domain
CDD cd00072 GYF
PANTHER PTHR13115:SF14 ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 19
Pfam PF02213 GYF domain
Pfam PF03126 Plus-3 domain
Gene3D G3DSA:3.30.40.10 Zinc/RING finger domain
SUPERFAMILY SSF57903 FYVE/PHD zinc finger
SMART SM00719 rtf1
Gene3D G3DSA:4.10.1000.10 CCCH zinc finger
CDD cd15568 PHD5_NSD
Coils Coil Coil
GO GO:0046872 metal ion binding
GO GO:0005515 protein binding
GO GO:0003677 DNA binding
MapolyID Mapoly0157s0010 -

Nomenclature

Gene symbol Product Transcript ID Status
MpC3H16 transcription factor, C3H Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v7.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp4g08690.1 chr4:9661767..9673417 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.