Mp4g11380



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
ProSitePatterns PS00028 Zinc finger C2H2 type domain signature.
Coils Coil Coil
ProSiteProfiles PS50157 Zinc finger C2H2 type domain profile.
Pfam PF13912 C2H2-type zinc finger
PANTHER PTHR45988 C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED
SMART SM00355 c2h2final6
PANTHER PTHR45988:SF18 C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY
SUPERFAMILY SSF57667 beta-beta-alpha zinc fingers
GO GO:0003700 DNA-binding transcription factor activity
MapolyID Mapoly0011s0122 -

Nomenclature

Gene symbol Product Transcript ID Status
MpC2H2-3 transcription factor, C2H2-ZnF Published
MpDAZ1 C2H2 Zn-finger transcription factor, ortholog of Arabidopsis thaliana DAZ1 and DAZ2 Published

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v7.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp4g11380.1 chr4:12542319..12546338 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.