| Database | ID | Description |
|---|---|---|
| KEGG | K09419 | HSFF; heat shock transcription factor, other eukaryote |
| KOG | KOG0627 | Heat shock transcription factor; C-term missing; [K] |
| ProSitePatterns | PS00434 | HSF-type DNA-binding domain signature. |
| SUPERFAMILY | SSF46785 | "Winged helix" DNA-binding domain |
| Gene3D | G3DSA:1.10.10.10 | ""winged helix"" repressor DNA binding domain |
| SMART | SM00415 | hsfneu3 |
| PANTHER | PTHR10015 | HEAT SHOCK TRANSCRIPTION FACTOR |
| PRINTS | PR00056 | Heat shock factor (HSF) domain signature |
| PANTHER | PTHR10015:SF304 | HEAT STRESS TRANSCRIPTION FACTOR B-4B |
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| Pfam | PF00447 | HSF-type DNA-binding |
| GO | GO:0043565 | sequence-specific DNA binding |
| GO | GO:0003700 | DNA-binding transcription factor activity |
| GO | GO:0006355 | regulation of transcription, DNA-templated |
| MapolyID | Mapoly0011s0205 | - |
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpHSF1 | transcription factor, HSF | Published |
Single-copy HSFB1 of Marchantia; Mphsfb1 CRISPR knockout studied under HS and non-HS conditions. Regulates development (meristem branching, antheridiophore formation, cell division, cell-wall, transporters) with mutants failing to form antheridiophores; induces GABA accumulation under heat, representing the rapidly evolved HSFB subclass.
1 core 2 peripheral
Caution: MBEX data are analyzed based on the v7.1 genome.
Link to the original image in MBEX
Sequences: |
Gene UTR + CDS + intron |
| >Mp4g12230.1 gagagcgggt cggtcgggtg gtggcgccta cacacactcg cagacagact atgcactgct tctactacta caaacaagaa ccgttggctc acttcaatat ctcagaagga gcagaaactc gaagaagaag aagtagaaga agaaggcctc tctgattcct cgagctcctt tcctccgtca cctcacttgc tgtgtcgctt gcctcctctc cctctctctc tctctctcga ctcggagaac tccgacccga gtctgtcgcg cgtcgaaatt tctctcaggc tgccgtccta cactccagtc cattccattc atctgactct acgaagaagg aaggacgtgt ggaggttgtg gctcgattct gaagtgaagc aaaccactgt tgactcgttc tttgtgctcg ctactcgagc tctagctcac cgcttgtgag cagcgtgctt agctgcgacg atccgcttcg tcgaaagtgt gcgtgcatcc atcgctctcc gggtggtgag ctgcagaaca acgaacgtcc caccacctgc tgttaatccg ctgctcgctt cggctcctcg cttctagcat catccctcca ggacctggga ttttgtgtgc cgccgccccg gacctccgag tgcaccattt gatcgttgca ctctcgctgc gcagagaaac gtgctctctg agacagtcgt cgggacctgg tgcacgtgga cttatcaaag aagacccgag aatcggctgc gaaccgcact gtagattgat gacttctgcg gtgtcgggga ttggatattc aggccgccga acggctcgtc gaagtctgct gccctttcat tctcgttaag aaaagctcgg ctgggatttg aacttcccgg cctgcattcg gggtgcagta tattgcttgc acgtcgtcac caagtgctcg gatgcttgga tcagttagtc ggattgtggt cagtgccagc agctagtcac gtgggtttca cactccgatc acagcgtgcc tctctacagc ccacacggtc gaggacgttt ggggattatg ctgaagcgtc gtcgattgcg attcgcgtgc ggacggaagt tgtcttcgag gcaatgttgg taattttaac aagccgagtt tgagtcgtac cactcagatc ctgtacaatt gggtccatag cagctgcagc tgagccgagg caacccactc aagcctaact ggcttggctc ggtgtctcgc ggcctgggtg caattgaggc cgtatgatca aggcggggca gacctgcatc tgaaaatttg agacttgtgg taccgagaga gtgaagtgaa gtcgaacttt tacatcataa ggtgtcagac ccttgggatt aaagtgctgt actcacctat ttgacgatga cgctgctttt cgataacaac gaaggtggat tcctctcaga gtcccaccgt tcgatgccag caccgtttct caccaagacg taccagctgg tcgatgatcc agctaccaat gagatcgtat cttggggcga agacgacacg acatttgtag tatggaggcc acccgagttc gcccgggatc tgcttcccaa ctacttcaag cacaacaact tttcaagttt cgtgcggcag cttaatactt acgtgagtat ctctcgtctc gtctctatga acaactacac gatcttgggc aaccattctc tctgatcgtc gactatctta gggtctctat gttttgtctg ctgcggagct gagcgattgc agacgccctc gttgctcgtt cataatcgac ttgtgtggca atttttttgc ctcggagtcg ttacaggcac tgtgcgccta atgtctgttc cctgcccaga tggcgatgat aagtccactg tagaatgtct agaatttctc actctgtcgt aagaatcaat cacattgagt atcaaaccaa gatagatccg atattcgtct caaatgtcgt gatatggaga cgtcaagata gagtaataga aatccactac ctcattcagc agggttcaag agatgtagac ggttgatgtc ctgttcgaag gaatggaggt tgactttcaa tcaaggacga gactttgggg ttgtctgagg gtgaacgtcg ttatcttgaa agatttagtg gtgccaagtt cgtacatatg taaattacgg cagtctagta aattcgcagg ccgctgacat gcacgattgg gcgtgtccaa ctgcagggtt tccgaaagat cgttcccgat cgatgggagt tcgcgaacga gtattttcgc aaaggagaaa aacacctgct gtgcgaaata cataggagaa agacgtcgtc ccaagcaccg caaggaagct cgctgcaagc agctagatcg ctttctccgt catcgaattc ggctgacgaa caggcgtggt cgccactgtc gtcacctctt tcttcccctc gggcggtggc gaaccaggcc acagttctgt ccgtagccga ggataacgat aggttgagga gagataactc catgttaatt tcagaaatag cacgattgca caggttgtat gaggacatcc tcgtgtttct tcaagacaag atgcaggtcc cttcgtcaga tctgagctgg ttgactaaaa ggttaaattg ccatccggcc atggagccgc aaataataca agcagtgcct gcctcgaggc tgggcgactc aaaatctcgg gccgacatca tgtgggaaga caaaatggtt cgggagcggg aacaagactg tattccaccg tcgcaggaaa gtacttgcac cttgcagttt gtggccttgc agacgcccgg cctatcgtcg tccctgcgag actgcaccac gccaacggcg tcaaccttgt cctttctgga cgcgaaactt agagaaatgg cctcgacatc aggccagcct cgtgtcgacg attccagaag tggtccgaag cttttcggtg ttcctctaca cggcaagagg aggatgaatg caggcggttg ggatgatctc gagcttgcca gtaagagagt gtgttcgttc agcttggaag aaattgatcc taatagaagc gtaggtaagg atatgaacca aaggcctctt ccagcgaaga gcgtcaagac tgagttagct ttggaattaa gaccttcagc ggtcgaatca gccccatggc taaaatttag tgccacacgg gacgagagag tatacatcta gataccgatc gtaaatgctt aatacacgcc attttttccg agtagcagct tgttcttagc gaagatattc accgatctgt tcttagaact gactgcgatg taaagaaaag atctttccaa gcaatatact gacaattgta acgctacctc atgtggcctg tggatggata gtctcgttcg cttctagtcg attctggtct ggttaaggtc ttgaataacg aagtgattct gacttgctat gttctgacgc agtctgaatc ccgttatccc tcttcgcttt ttcttctctt tagagtcagc aaaacacttg gcactatcta aatgcgagtt tttcagacgt gcaccttcca tgcactgatc ttcgtgctgt cgactaacac aagcgtagga gccatgattt tgaccctgaa cac |
mRNA UTR + CDS |
| >Mp4g12230.1 gagagcgggt cggtcgggtg gtggcgccta cacacactcg cagacagact atgcactgct tctactacta caaacaagaa ccgttggctc acttcaatat ctcagaagga gcagaaactc gaagaagaag aagtagaaga agaaggcctc tctgattcct cgagctcctt tcctccgtca cctcacttgc tgtgtcgctt gcctcctctc cctctctctc tctctctcga ctcggagaac tccgacccga gtctgtcgcg cgtcgaaatt tctctcaggc tgccgtccta cactccagtc cattccattc atctgactct acgaagaagg aaggacgtgt ggaggttgtg gctcgattct gaagtgaagc aaaccactgt tgactcgttc tttgtgctcg ctactcgagc tctagctcac cgcttgtgag cagcgtgctt agctgcgacg atccgcttcg tcgaaagtgt gcgtgcatcc atcgctctcc gggtggtgag ctgcagaaca acgaacgtcc caccacctgc tgttaatccg ctgctcgctt cggctcctcg cttctagcat catccctcca ggacctggga ttttgtgtgc cgccgccccg gacctccgag tgcaccattt gatcgttgca ctctcgctgc gcagagaaac gtgctctctg agacagtcgt cgggacctgg tgcacgtgga cttatcaaag aagacccgag aatcggctgc gaaccgcact gtagattgat gacttctgcg gtgtcgggga ttggatattc aggccgccga acggctcgtc gaagtctgct gccctttcat tctcgttaag aaaagctcgg ctgggatttg aacttcccgg cctgcattcg gggtgcagta tattgcttgc acgtcgtcac caagtgctcg gatgcttgga tcagttagtc ggattgtggt cagtgccagc agctagtcac gtgggtttca cactccgatc acagcgtgcc tctctacagc ccacacggtc gaggacgttt ggggattatg ctgaagcgtc gtcgattgcg attcgcgtgc ggacggaagt tgtcttcgag gcaatgttgg taattttaac aagccgagtt tgagtcgtac cactcagatc ctgtacaatt gggtccatag cagctgcagc tgagccgagg caacccactc aagcctaact ggcttggctc ggtgtctcgc ggcctgggtg caattgaggc cgtatgatca aggcggggca gacctgcatc tgaaaatttg agacttgtgg taccgagaga gtgaagtgaa gtcgaacttt tacatcataa ggtgtcagac ccttgggatt aaagtgctgt actcacctat ttgacgatga cgctgctttt cgataacaac gaaggtggat tcctctcaga gtcccaccgt tcgatgccag caccgtttct caccaagacg taccagctgg tcgatgatcc agctaccaat gagatcgtat cttggggcga agacgacacg acatttgtag tatggaggcc acccgagttc gcccgggatc tgcttcccaa ctacttcaag cacaacaact tttcaagttt cgtgcggcag cttaatactt acggtttccg aaagatcgtt cccgatcgat gggagttcgc gaacgagtat tttcgcaaag gagaaaaaca cctgctgtgc gaaatacata ggagaaagac gtcgtcccaa gcaccgcaag gaagctcgct gcaagcagct agatcgcttt ctccgtcatc gaattcggct gacgaacagg cgtggtcgcc actgtcgtca cctctttctt cccctcgggc ggtggcgaac caggccacag ttctgtccgt agccgaggat aacgataggt tgaggagaga taactccatg ttaatttcag aaatagcacg attgcacagg ttgtatgagg acatcctcgt gtttcttcaa gacaagatgc aggtcccttc gtcagatctg agctggttga ctaaaaggtt aaattgccat ccggccatgg agccgcaaat aatacaagca gtgcctgcct cgaggctggg cgactcaaaa tctcgggccg acatcatgtg ggaagacaaa atggttcggg agcgggaaca agactgtatt ccaccgtcgc aggaaagtac ttgcaccttg cagtttgtgg ccttgcagac gcccggccta tcgtcgtccc tgcgagactg caccacgcca acggcgtcaa ccttgtcctt tctggacgcg aaacttagag aaatggcctc gacatcaggc cagcctcgtg tcgacgattc cagaagtggt ccgaagcttt tcggtgttcc tctacacggc aagaggagga tgaatgcagg cggttgggat gatctcgagc ttgccagtaa gagagtgtgt tcgttcagct tggaagaaat tgatcctaat agaagcgtag gtaaggatat gaaccaaagg cctcttccag cgaagagcgt caagactgag ttagctttgg aattaagacc ttcagcggtc gaatcagccc catggctaaa atttagtgcc acacgggacg agagagtata catctagata ccgatcgtaa atgcttaata cacgccattt tttccgagta gcagcttgtt cttagcgaag atattcaccg atctgttctt agaactgact gcgatgtaaa gaaaagatct ttccaagcaa tatactgaca attgtaacgc tacctcatgt ggcctgtgga tggatagtct cgttcgcttc tagtcgattc tggtctggtt aaggtcttga ataacgaagt gattctgact tgctatgttc tgacgcagtc tgaatcccgt tatccctctt cgctttttct tctctttaga gtcagcaaaa cacttggcac tatctaaatg cgagtttttc agacgtgcac cttccatgca ctgatcttcg tgctgtcgac taacacaagc gtaggagcca tgattttgac cctgaacac |
CDS |
| >Mp4g12230.1 atgacgctgc ttttcgataa caacgaaggt ggattcctct cagagtccca ccgttcgatg ccagcaccgt ttctcaccaa gacgtaccag ctggtcgatg atccagctac caatgagatc gtatcttggg gcgaagacga cacgacattt gtagtatgga ggccacccga gttcgcccgg gatctgcttc ccaactactt caagcacaac aacttttcaa gtttcgtgcg gcagcttaat acttacggtt tccgaaagat cgttcccgat cgatgggagt tcgcgaacga gtattttcgc aaaggagaaa aacacctgct gtgcgaaata cataggagaa agacgtcgtc ccaagcaccg caaggaagct cgctgcaagc agctagatcg ctttctccgt catcgaattc ggctgacgaa caggcgtggt cgccactgtc gtcacctctt tcttcccctc gggcggtggc gaaccaggcc acagttctgt ccgtagccga ggataacgat aggttgagga gagataactc catgttaatt tcagaaatag cacgattgca caggttgtat gaggacatcc tcgtgtttct tcaagacaag atgcaggtcc cttcgtcaga tctgagctgg ttgactaaaa ggttaaattg ccatccggcc atggagccgc aaataataca agcagtgcct gcctcgaggc tgggcgactc aaaatctcgg gccgacatca tgtgggaaga caaaatggtt cgggagcggg aacaagactg tattccaccg tcgcaggaaa gtacttgcac cttgcagttt gtggccttgc agacgcccgg cctatcgtcg tccctgcgag actgcaccac gccaacggcg tcaaccttgt cctttctgga cgcgaaactt agagaaatgg cctcgacatc aggccagcct cgtgtcgacg attccagaag tggtccgaag cttttcggtg ttcctctaca cggcaagagg aggatgaatg caggcggttg ggatgatctc gagcttgcca gtaagagagt gtgttcgttc agcttggaag aaattgatcc taatagaagc gtaggtaagg atatgaacca aaggcctctt ccagcgaaga gcgtcaagac tgagttagct ttggaattaa gaccttcagc ggtcgaatca gccccatggc taaaatttag tgccacacgg gacgagagag tatacatcta g |
Protein |
| >Mp4g12230.1 MTLLFDNNEG GFLSESHRSM PAPFLTKTYQ LVDDPATNEI VSWGEDDTTF VVWRPPEFAR DLLPNYFKHN NFSSFVRQLN TYGFRKIVPD RWEFANEYFR KGEKHLLCEI HRRKTSSQAP QGSSLQAARS LSPSSNSADE QAWSPLSSPL SSPRAVANQA TVLSVAEDND RLRRDNSMLI SEIARLHRLY EDILVFLQDK MQVPSSDLSW LTKRLNCHPA MEPQIIQAVP ASRLGDSKSR ADIMWEDKMV REREQDCIPP SQESTCTLQF VALQTPGLSS SLRDCTTPTA STLSFLDAKL REMASTSGQP RVDDSRSGPK LFGVPLHGKR RMNAGGWDDL ELASKRVCSF SLEEIDPNRS VGKDMNQRPL PAKSVKTELA LELRPSAVES APWLKFSATR DERVYI |