| Database | ID | Description |
|---|---|---|
| KEGG | K15332 | TRMT2A; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.-] |
| KOG | KOG2187 | tRNA uracil-5-methyltransferase and related tRNA-modifying enzymes; N-term missing; [J] |
| ProSitePatterns | PS01230 | RNA methyltransferase trmA family signature 1. |
| Coils | Coil | Coil |
| ProSiteProfiles | PS51687 | SAM-dependent methyltransferase RNA m(5)U-type domain profile. |
| SUPERFAMILY | SSF54928 | RNA-binding domain, RBD |
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| Gene3D | G3DSA:3.30.70.330 | - |
| ProSiteProfiles | PS50103 | Zinc finger C3H1-type profile. |
| SMART | SM00356 | c3hfinal6 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases |
| Gene3D | G3DSA:4.10.1000.10 | CCCH zinc finger |
| Pfam | PF05958 | tRNA (Uracil-5-)-methyltransferase |
| PANTHER | PTHR45904 | TRNA (URACIL-5-)-METHYLTRANSFERASE |
| CDD | cd00590 | RRM_SF |
| CDD | cd02440 | AdoMet_MTases |
| PANTHER | PTHR45904:SF2 | TRNA (URACIL-5-)-METHYLTRANSFERASE HOMOLOG A |
| SUPERFAMILY | SSF90229 | CCCH zinc finger |
| Pfam | PF00642 | Zinc finger C-x8-C-x5-C-x3-H type (and similar) |
| GO | GO:0003676 | nucleic acid binding |
| GO | GO:0046872 | metal ion binding |
| GO | GO:0008173 | RNA methyltransferase activity |
| GO | GO:0006396 | RNA processing |
| MapolyID | Mapoly0078s0012 | - |
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpC3H19 | transcription factor, C3H | Provisional |
Caution: MBEX data are analyzed based on the v7.1 genome.
Link to the original image in MBEX
Sequences: |
Gene UTR + CDS + intron |
| >Mp5g00110.1 attgtcagca ggagaaaagc cttatcactg tgtacactct gccactacct ggaacaaaat cctggggaga caacctgcac tatcttctgc acctcaggac gcggacagtg acaagcagtg tgcattcttg atccctgcag gctgaggagc agtgaacgac attcaaattc cgacgtatgc cttgtatctt gcgtgcccgc gccaacgacg cagttcccaa gaggttactg tactgtggac attgcgaagg gtttgagaaa ttaggctaga cacttcacct gctgccttcc taccagcggg agaaagacgg cgctccgtcg ctcccctagt aggggtttat gccttcggag catactcctt cactgaatag ctttgaggtt ttgaaattga tgaacgcggt ggccgcacag gtcggcgtac agcggtacag ggaaaatcat aggcatcttc tccgaacggg ggaaattata gacatctttt ccgaacgttg atttcctcag agtatcaaag agctggcgaa cgaagtaggc gctcagtgca gattaacact gcctgcacta gctgaagaag ctgcgcagag cttcgacaat ggggaagcgg gaagggaaat cgtccaaaag atcgaagccc gaagtggaag aagaaacaaa tgcagctgat gaagcacgtt cccaacctgc gattgctgaa gagcctcctg ccaaacaacc caagactgag catggaggac aggacgataa atcgagtagc gtgtcggctg caagtgaacc aaacccagct gctgagcaaa gtgacgaagt tgggaaaatg tcaagcaagg ccttgccagc tgatttatct ggcgtagtag caaatgtgcc gcgtatgaaa acaagtctct gctcctactt ccggaagggg aactgtagac acggagattt gtgcagatat gcgcacggtg aagctgagct taagcctaga cctgatggct cctgggatcc cacttctgac tttgccaaga gtttagccag ggacgctcta cctgttcccg ccgcagttaa acttgttgct ccaatttcag tggctgaaga ggcagctgaa gatgattctt cagaaattac aatcaagaag tgcatcacgc ctgtgcagcc acggtggtct aatgatgatt taaaaaaatt cttgactgat atggtaatga ctggaataat ttgcgcttct attgactttt tcacaagtct gtcaagaaat ctcctttatg aatttcggtt tcgccttctg tctctttcgg cggcttgaac cctagcgacg atattgctcc ggaatttgta tagagccttt aattagttca atttattacg tctccggtag tgagtagagc tcatgatttc gcacggaaca agcttgttta gagggattgt aaagtcgttc aaagctttgg aattcgcagg gtttcaatat acaaatcaag tgcggcttca agttttaagc caggcgccga agcgagaaaa caagagtcag gttttgcctt ctttcaatct tttgggtact tctttcagta acattctgtt cctactcttt gcagaatatc tcatttgtca ctgccaaaaa gaggagggga gatagaacag cttttgttgg ttttcaggat gaagatcagg tggccagcgc aataaaggta tgtacgctat cttctcggga ttcagtatct tggatagcat atatattgaa tgctgttcaa attgtagaca ttgaagactg taactaagtt gtcacaattt tgagcgacct ttttccgatg agggttttta atggaattct agaggaattt atgtcactcc taaccaaaag cggagttatc tcgatcgctt gctcttgatc tcattctgaa tatcgatatt cttcatatgc ggtcattcca tactggtccc gccgtaacag tggatcgcga gcgtagtcat ttgaagccca ggtgtgaaaa ttgatttttg agagagaggc ttcattggta gtttttgggt caagaatatg tagggcctga attcccatcg tggggccagc agatttttga tagcatcaag gaaggtggtc gaaagatgca agtcaaagat gtccttccgc gtacatggga aaggaatgct gaaaatgtga gtgctgtgga cgatgtaatg gctgatgcgg acaacgacga agggatggaa gctgcaaagc cgggagtcac aattcgagtt aaaaacatat gcgatgcagt gactcctcta ggacatctga cctacgaaga gcagcttaat atcaagagag aggacgttac tcaagtcctc aagcgacttg tatgttgatc tgaactggct atatcttgct tttgtagagt tgagaagctc ttgcagagta ctatgtgtgc agtgatctat ttaagaaccc ctggtctctt ctccaagttc taaactcacc tccatacctc ttgcaggctc gtaatacccg aaagggactt cctgcgggag tattgatgcc cgactggatg attgccgcga gggataatgg taagattcga cagcgaattg ttattgcatg gcaccaacat attgttcaga acctgaatac agaatgtcca tgagtgctct caattttcgt agtatgtttt tccttgtcgc atgtcttcat ggtttccctt cttcaagcta ttctaatttc acctcgccga gatttggtcc tggtaatact tgaattttgg tgcccataat atattcaccc tccctttgtc tcataccctc gtggagacta tttgtatcct gtatactgaa cctacttcca attgtctaaa tggcttggac actttagcgt ttaaactctc aaaccagcga acaatcgcat ttaaactact actgtctgta taggaggact gccatgtgcg ttggaaggag tactttcatc accagttgtc gatggatacc gtaacaaatg cgagttcagt atcggctgcg cagttgacgg gaccagagcc gtaggctttc aactaggttc cttcaggttc gttaatattt ggacagatat gttctgtagt ggattctagg tactgatcag aatagttgta agaactcgct tggacctgtg tagaaagtcc tgccaactta acatgccttc ctcattgaaa cagggagggt atactagctg tggcagagcc gaccgactgt cggaatgttt caagtatagc acgttcatat gccgctgtct tccaaaagtt tgtccaaatc tccgacttac ctgtctggaa taagacgaac aacaagggtt tctggcgtat gctcacggtg agtaaagatc aagtacattg atgatgtcta ctgatctgat gaagctttac tattagcatc acatagctac tgagaaatct gaggcattat gtgaaccccc acttataaga gtacagtatt gctcgttcag gttcgagaag gtcgtggttc tcttgaaaag aatgccggtg aacaaccttc tgtcagcgaa gtgatgctgt tggtgcaggt ctgtatatct ttcagtgttt ttgagatgtt tcttggatgt tcatacgaga tatgtacttt ttgaacaagt gtcacttaac cagctatcac tcgcgttgag tgcaggtttg tccgactggc attgatgaag aaaccaggaa cgtggagtac aagaagatgg tggaccatct gtcactagca tcttctgctg cttcgcctcc tcttcctctt acagcactga ttgttcaggt gggtcgcttc actcttgttt cttggtctgg ttcacttact ggatcgcagt tcattgcata aactattctt actcttgaca tgaaaagaga atgataatga cagtttcagt cctctgatat gacaaataag ctctaacaca attaaggtcg ctcacttgtt tccaggatca taccggcgtg tcaaatgctg cccctgctaa tgcacctttg cacgccttga ccatacctgg ggagcaccct aaagcacaag caccagttaa ttatatccac gatcatatta gcaacttaaa gttccgcatt tctcctaccg catttttcca ggttggttca cctcatgctt ggctttgctt agcaacctgc tttcgtccaa gttgagtctt ttccatgcaa cccatactcg tgtggtggtt gctgtatgaa gaactgcaaa tacaatagat aagagtatcg ggcatgtgtg caggttaaca ctctggcggc cgagagactc tacagtctcg caggggactg ggcggagctg acaccagaca cgcttctttt tgatgtctgc tgtgggactg gaacaattgg cttgacattg gctcaccgag ttgggatggt attgttacta gtgtttaacc aattattcct acctctaggc agtctcctgg attaaagtgt actttggggt ttcgatattg ctctacacca caaattccat cagaaatcat tggtctgttt tgagtagttt gtgtttgacg ggatggccca tatgttcgtc gttatgtgcg agatttcttg ttaacattct ttctgcgtgt catcttgcaa gactgttgag ccatgaaata actgtgtcaa gcgattgtat gtggctaggt tgtgggaata gagatgaatc aatcggcggt tgccgatgct aagcagaatg cagaaattaa taacatcacc aactgccgct ttgttgccag caaggttggt ctctttcgtt gttatccctc tgcgttttag ttgaacatct acaacttaat gattatagtg cgaaatacac ccttttggtg tgtactgcgg ttgttgagtt cacaccaaac tagaagctac atgacaatga cctaaggttg acagtagtag tttgtcgaga tattatacct gctgaaggtt ttgcaaggtt ttgtttgttc atgtgtggcc ttaatgatcc gatatatgct cttatttgca ttaaccacac aggcagaaga tgtgatggaa agtctgctga gggagtatat tacgtccgaa ggggaagaag agaattctga aaatgaggcc gagtcagttg agaagaaagg cgacaagaaa cgatttaaga acattgtagc gatagttgat cctccacgag ttggtcttca ccctgttgta agaacgagga gattatgatg gacctcattt catgatttat gaacatataa gtacaaatca atctggtccc attatctcta gagctgattc cgttcctttc tgatccttat caaccgtaca ggtactgaaa actcttcgac ttcacacaca gttacggcgt cttgtgtgag tatcactggc acttataacg tcgcattacc tcaatatgaa agaagacaca tttgacggtt gattatgacc aggtttttaa tgttactaac gcgtctgtcg cttggcatcg acagatatat atcgtgcaat ccccaaagct tgttagccaa cgcggtggaa ctgtgcacac cattaagtcg agagaacagc accgagaagg gaagtggccg gggaaattgg agaggtttga gtaatgtcgg cctagcgcgc aatcgtatca agaaaatgcc tccatctaca ccattcaacc caaagaaggc catggctgta gacttattcc cgcatacaag ccattgtgaa atggtgatgc tctttgaaag ataaagagcg tgatccattc ccagtactta ggtggagaaa ttatccagct agttttattt atgtaccttc tcttgtaaac aaccttagca tatccttttc gctcacatga tgagaaggat cggcctcagc ccaggacaaa aaaagatata gggcataaac cgtacgtatt gatgtcctct acgttctggg aagctacgaa atgagtaggt tttttttatt tgagaatttt tcgcatctga tatgtgggta gaattgctcc tattgtacca acatttgtag tctgagttat gatagttctg ccattcttta ctatcattat attcagggct agaccctttg aagaatattt tagctc |
mRNA UTR + CDS |
| >Mp5g00110.1 attgtcagca ggagaaaagc cttatcactg tgtacactct gccactacct ggaacaaaat cctggggaga caacctgcac tatcttctgc acctcaggac gcggacagtg acaagcagtg tgcattcttg atccctgcag gctgaggagc agtgaacgac attcaaattc cgacgtatgc cttgtatctt gcgtgcccgc gccaacgacg cagttcccaa gaggttactg tactgtggac attgcgaagg gtttgagaaa ttaggctaga cacttcacct gctgccttcc taccagcggg agaaagacgg cgctccgtcg ctcccctagt aggggtttat gccttcggag catactcctt cactgaatag ctttgaggtt ttgaaattga tgaacgcggt ggccgcacag gtcggcgtac agcggtacag ggaaaatcat aggcatcttc tccgaacggg ggaaattata gacatctttt ccgaacgttg atttcctcag agtatcaaag agctggcgaa cgaagtaggc gctcagtgca gattaacact gcctgcacta gctgaagaag ctgcgcagag cttcgacaat ggggaagcgg gaagggaaat cgtccaaaag atcgaagccc gaagtggaag aagaaacaaa tgcagctgat gaagcacgtt cccaacctgc gattgctgaa gagcctcctg ccaaacaacc caagactgag catggaggac aggacgataa atcgagtagc gtgtcggctg caagtgaacc aaacccagct gctgagcaaa gtgacgaagt tgggaaaatg tcaagcaagg ccttgccagc tgatttatct ggcgtagtag caaatgtgcc gcgtatgaaa acaagtctct gctcctactt ccggaagggg aactgtagac acggagattt gtgcagatat gcgcacggtg aagctgagct taagcctaga cctgatggct cctgggatcc cacttctgac tttgccaaga gtttagccag ggacgctcta cctgttcccg ccgcagttaa acttgttgct ccaatttcag tggctgaaga ggcagctgaa gatgattctt cagaaattac aatcaagaag tgcatcacgc ctgtgcagcc acggtggtct aatgatgatt taaaaaaatt cttgactgat atgaatatct catttgtcac tgccaaaaag aggaggggag atagaacagc ttttgttggt tttcaggatg aagatcaggt ggccagcgca ataaagattt ttgatagcat caaggaaggt ggtcgaaaga tgcaagtcaa agatgtcctt ccgcgtacat gggaaaggaa tgctgaaaat gtgagtgctg tggacgatgt aatggctgat gcggacaacg acgaagggat ggaagctgca aagccgggag tcacaattcg agttaaaaac atatgcgatg cagtgactcc tctaggacat ctgacctacg aagagcagct taatatcaag agagaggacg ttactcaagt cctcaagcga cttgctcgta atacccgaaa gggacttcct gcgggagtat tgatgcccga ctggatgatt gccgcgaggg ataatggagg actgccatgt gcgttggaag gagtactttc atcaccagtt gtcgatggat accgtaacaa atgcgagttc agtatcggct gcgcagttga cgggaccaga gccgtaggct ttcaactagg ttccttcagg gagggtatac tagctgtggc agagccgacc gactgtcgga atgtttcaag tatagcacgt tcatatgccg ctgtcttcca aaagtttgtc caaatctccg acttacctgt ctggaataag acgaacaaca agggtttctg gcgtatgctc acggttcgag aaggtcgtgg ttctcttgaa aagaatgccg gtgaacaacc ttctgtcagc gaagtgatgc tgttggtgca ggtttgtccg actggcattg atgaagaaac caggaacgtg gagtacaaga agatggtgga ccatctgtca ctagcatctt ctgctgcttc gcctcctctt cctcttacag cactgattgt tcaggatcat accggcgtgt caaatgctgc ccctgctaat gcacctttgc acgccttgac catacctggg gagcacccta aagcacaagc accagttaat tatatccacg atcatattag caacttaaag ttccgcattt ctcctaccgc atttttccag gttaacactc tggcggccga gagactctac agtctcgcag gggactgggc ggagctgaca ccagacacgc ttctttttga tgtctgctgt gggactggaa caattggctt gacattggct caccgagttg ggatggttgt gggaatagag atgaatcaat cggcggttgc cgatgctaag cagaatgcag aaattaataa catcaccaac tgccgctttg ttgccagcaa ggcagaagat gtgatggaaa gtctgctgag ggagtatatt acgtccgaag gggaagaaga gaattctgaa aatgaggccg agtcagttga gaagaaaggc gacaagaaac gatttaagaa cattgtagcg atagttgatc ctccacgagt tggtcttcac cctgttgtac tgaaaactct tcgacttcac acacagttac ggcgtcttgt atatatatcg tgcaatcccc aaagcttgtt agccaacgcg gtggaactgt gcacaccatt aagtcgagag aacagcaccg agaagggaag tggccgggga aattggagag gtttgagtaa tgtcggccta gcgcgcaatc gtatcaagaa aatgcctcca tctacaccat tcaacccaaa gaaggccatg gctgtagact tattcccgca tacaagccat tgtgaaatgg tgatgctctt tgaaagataa agagcgtgat ccattcccag tacttaggtg gagaaattat ccagctagtt ttatttatgt accttctctt gtaaacaacc ttagcatatc cttttcgctc acatgatgag aaggatcggc ctcagcccag gacaaaaaaa gatatagggc ataaaccgta cgtattgatg tcctctacgt tctgggaagc tacgaaatga gtaggttttt tttatttgag aatttttcgc atctgatatg tgggtagaat tgctcctatt gtaccaacat ttgtagtctg agttatgata gttctgccat tctttactat cattatattc agggctagac cctttgaaga atattttagc tc |
CDS |
| >Mp5g00110.1 atggggaagc gggaagggaa atcgtccaaa agatcgaagc ccgaagtgga agaagaaaca aatgcagctg atgaagcacg ttcccaacct gcgattgctg aagagcctcc tgccaaacaa cccaagactg agcatggagg acaggacgat aaatcgagta gcgtgtcggc tgcaagtgaa ccaaacccag ctgctgagca aagtgacgaa gttgggaaaa tgtcaagcaa ggccttgcca gctgatttat ctggcgtagt agcaaatgtg ccgcgtatga aaacaagtct ctgctcctac ttccggaagg ggaactgtag acacggagat ttgtgcagat atgcgcacgg tgaagctgag cttaagccta gacctgatgg ctcctgggat cccacttctg actttgccaa gagtttagcc agggacgctc tacctgttcc cgccgcagtt aaacttgttg ctccaatttc agtggctgaa gaggcagctg aagatgattc ttcagaaatt acaatcaaga agtgcatcac gcctgtgcag ccacggtggt ctaatgatga tttaaaaaaa ttcttgactg atatgaatat ctcatttgtc actgccaaaa agaggagggg agatagaaca gcttttgttg gttttcagga tgaagatcag gtggccagcg caataaagat ttttgatagc atcaaggaag gtggtcgaaa gatgcaagtc aaagatgtcc ttccgcgtac atgggaaagg aatgctgaaa atgtgagtgc tgtggacgat gtaatggctg atgcggacaa cgacgaaggg atggaagctg caaagccggg agtcacaatt cgagttaaaa acatatgcga tgcagtgact cctctaggac atctgaccta cgaagagcag cttaatatca agagagagga cgttactcaa gtcctcaagc gacttgctcg taatacccga aagggacttc ctgcgggagt attgatgccc gactggatga ttgccgcgag ggataatgga ggactgccat gtgcgttgga aggagtactt tcatcaccag ttgtcgatgg ataccgtaac aaatgcgagt tcagtatcgg ctgcgcagtt gacgggacca gagccgtagg ctttcaacta ggttccttca gggagggtat actagctgtg gcagagccga ccgactgtcg gaatgtttca agtatagcac gttcatatgc cgctgtcttc caaaagtttg tccaaatctc cgacttacct gtctggaata agacgaacaa caagggtttc tggcgtatgc tcacggttcg agaaggtcgt ggttctcttg aaaagaatgc cggtgaacaa ccttctgtca gcgaagtgat gctgttggtg caggtttgtc cgactggcat tgatgaagaa accaggaacg tggagtacaa gaagatggtg gaccatctgt cactagcatc ttctgctgct tcgcctcctc ttcctcttac agcactgatt gttcaggatc ataccggcgt gtcaaatgct gcccctgcta atgcaccttt gcacgccttg accatacctg gggagcaccc taaagcacaa gcaccagtta attatatcca cgatcatatt agcaacttaa agttccgcat ttctcctacc gcatttttcc aggttaacac tctggcggcc gagagactct acagtctcgc aggggactgg gcggagctga caccagacac gcttcttttt gatgtctgct gtgggactgg aacaattggc ttgacattgg ctcaccgagt tgggatggtt gtgggaatag agatgaatca atcggcggtt gccgatgcta agcagaatgc agaaattaat aacatcacca actgccgctt tgttgccagc aaggcagaag atgtgatgga aagtctgctg agggagtata ttacgtccga aggggaagaa gagaattctg aaaatgaggc cgagtcagtt gagaagaaag gcgacaagaa acgatttaag aacattgtag cgatagttga tcctccacga gttggtcttc accctgttgt actgaaaact cttcgacttc acacacagtt acggcgtctt gtatatatat cgtgcaatcc ccaaagcttg ttagccaacg cggtggaact gtgcacacca ttaagtcgag agaacagcac cgagaaggga agtggccggg gaaattggag aggtttgagt aatgtcggcc tagcgcgcaa tcgtatcaag aaaatgcctc catctacacc attcaaccca aagaaggcca tggctgtaga cttattcccg catacaagcc attgtgaaat ggtgatgctc tttgaaagat aa |
Protein |
| >Mp5g00110.1 MGKREGKSSK RSKPEVEEET NAADEARSQP AIAEEPPAKQ PKTEHGGQDD KSSSVSAASE PNPAAEQSDE VGKMSSKALP ADLSGVVANV PRMKTSLCSY FRKGNCRHGD LCRYAHGEAE LKPRPDGSWD PTSDFAKSLA RDALPVPAAV KLVAPISVAE EAAEDDSSEI TIKKCITPVQ PRWSNDDLKK FLTDMNISFV TAKKRRGDRT AFVGFQDEDQ VASAIKIFDS IKEGGRKMQV KDVLPRTWER NAENVSAVDD VMADADNDEG MEAAKPGVTI RVKNICDAVT PLGHLTYEEQ LNIKREDVTQ VLKRLARNTR KGLPAGVLMP DWMIAARDNG GLPCALEGVL SSPVVDGYRN KCEFSIGCAV DGTRAVGFQL GSFREGILAV AEPTDCRNVS SIARSYAAVF QKFVQISDLP VWNKTNNKGF WRMLTVREGR GSLEKNAGEQ PSVSEVMLLV QVCPTGIDEE TRNVEYKKMV DHLSLASSAA SPPLPLTALI VQDHTGVSNA APANAPLHAL TIPGEHPKAQ APVNYIHDHI SNLKFRISPT AFFQVNTLAA ERLYSLAGDW AELTPDTLLF DVCCGTGTIG LTLAHRVGMV VGIEMNQSAV ADAKQNAEIN NITNCRFVAS KAEDVMESLL REYITSEGEE ENSENEAESV EKKGDKKRFK NIVAIVDPPR VGLHPVVLKT LRLHTQLRRL VYISCNPQSL LANAVELCTP LSRENSTEKG SGRGNWRGLS NVGLARNRIK KMPPSTPFNP KKAMAVDLFP HTSHCEMVML FER |