Mp5g01600



Description

Annotation

Database ID Description
KOG KOG0773 Transcription factor MEIS1 and related HOX domain proteins; [K]
PANTHER PTHR11850:SF288 HOMEOBOX PROTEIN SHOOT MERISTEMLESS
SMART SM00389 HOX_1
Gene3D G3DSA:1.10.10.60 -
CDD cd00086 homeodomain
SUPERFAMILY SSF46689 Homeodomain-like
ProSiteProfiles PS50071 'Homeobox' domain profile.
Coils Coil Coil
Pfam PF05920 Homeobox KN domain
PANTHER PTHR11850 HOMEOBOX PROTEIN TRANSCRIPTION FACTORS
GO GO:0003677 DNA binding
GO GO:0006355 regulation of transcription, DNA-templated
MapolyID Mapoly0175s0020 -

Nomenclature

Gene symbol Product Transcript ID Status
MpHD20 transcription factor, HD, homeodomain protein Published
MpKNOX1 transcription factor, HD, homeodomain protein Published

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v7.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp5g01600.1 chr5:2197559..2202465 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.